Oncorhynchus tshawytscha (Chinook salmon): 112264656
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Entry
112264656 CDS
T05605
Name
(RefSeq) partitioning defective 6 homolog gamma
KO
K06093
partitioning defective protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112264656
09144 Cellular community - eukaryotes
04530 Tight junction
112264656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112264656
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112264656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112264656
NCBI-ProteinID:
XP_024297176
LinkDB
All DBs
Position
LG13:complement(29639542..29686177)
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AA seq
446 aa
AA seq
DB search
MNRSFNKSQSSLQYFDCIAVEVKSKYGAEFRRFSVDRFKPGKFEDFYKLVMHVHRIANME
VMIGYADIHGDLLPINNDDNFCKAVSTAHPLLRVFIQRQEEVDYSSYGTHSLTRKKKAVV
ALRNDVNRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRASRISGSSGQSSDSSGSTGYPSLSTAAMATGAHGYPDELES
DEESDIVIESTLKRPSRRSSASMVSVTSRTSRSHIQAPPQAPVEPTNPPIRPLSVVSTSS
SHSQASLNGLSHHGSLSYMLHRDLNLQQPQLQNPQHHQTQHHSSNPALRESNSSLHKILS
TMRTDPRHSLALPRGGVEEDGTVITL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagttttaataaatcccaatcttccctgcaatattttgattgcatcgcggtt
gaagtgaaaagcaagtacggagcagagttccggcggttctccgtggaccggttcaaaccg
gggaagttcgaggacttctataagctcgtcatgcacgttcaccgcatcgccaacatggag
gtcatgattggctacgctgacatccacggagacctgctgccaatcaacaacgacgacaac
ttctgcaaggcggtgtctacggcccacccactgctccgggtcttcatacagagacaagag
gaggtcgactacagcagctatgggactcactctctgacccgaaagaagaaggctgtggtg
gcgctgcggaacgacgtcaacaggaagcgacctcacatccgtattggcatgccgcaggac
ttccggccagtctcctccatcatcgatgtggacatcttaccagagtcccaccgccgcgtt
cgtctctaccgccatggttctgacaaacccctggggttctacatccgggatgggacaagc
gtacgggtgacgccccatggcctggagaaggtgcctgggatttttatctcccgcatggtg
cctgggggcctggctgagagcacgggcctgctggccgtcaatgacgaggtcctggaggtc
aacggcattgaggtgactgggaagacgctagaccaggtaacggacatgatgatcgccaac
agtcacaacctgattgtcacagtgaagccggtgaaccagcggaacaatgtggtgcgagcc
agccggatatccggcagctccggtcagtcgtcagacagcagcggttccactggctacccc
agcctgtccaccgcagcaatggcaaccggtgcccatggctaccccgacgagctggaaagc
gatgaggagtcagacatcgttatcgagagcaccctcaagcggccgtcgaggcgctccagc
gcatcaatggtgtccgtgacttcaagaacgtcacgctcccatatccaagcccctccccag
gcccccgtggaacccaccaaccccccgatccgacccctctctgtggtttccacctcctcc
tcccactcccaggccagcctcaatggcctttctcaccacggcagcctcagctacatgctg
cacagggacctgaacctccagcagccccagttacagaacccgcagcatcaccaaacccag
caccacagcagcaacccagccctccgggagagcaacagcagcctgcacaaaatcctcagc
accatgaggacggaccctcgacacagcctggctctgccccggggaggggtggaagaggat
ggcaccgtcatcaccctataa
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