Oncorhynchus tshawytscha (Chinook salmon): 112265125
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Entry
112265125 CDS
T05605
Name
(RefSeq) 5'-3' exonuclease PLD3 isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00564
Glycerophospholipid metabolism
otw00565
Ether lipid metabolism
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112265125
00565 Ether lipid metabolism
112265125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265125
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
112265125
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
112265125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
CBM_21
Motif
Other DBs
NCBI-GeneID:
112265125
NCBI-ProteinID:
XP_024297953
LinkDB
All DBs
Position
LG13:complement(53371489..53384284)
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AA seq
485 aa
AA seq
DB search
MISDIPYEKMCNVESRREESCRKAQMYYRCLLGLTGVVSLLLAAVFLQTLLLPVVNSSPN
KPGFQLPLPLTDTCTDPCKIVLLESIPEGLEFNSSVTNPSIYQAWLNLISEARSSVDIAS
FYWTLTNKDTGSHEPTADKGEDVLNRLAQVSGKLSVRIAVNTPTESQHHEDLNLLQSSGA
DVRAVNMRDLTTGVLHTKFWVVDKKHIYIGSANMDWRSLTQVKELGAVVYNCSCLAADLG
KIFEAYWYLGQKDTPIPSPWPSSFNTLYNKDSPLQLPLNGTASHVYLTSSPPSFCAAGRT
GDLQSILSVMEDAQEFIYIAVMNYLPTMEFSRPKRYWAEIDTQIRRVAYEKRVKVRLLIS
CWASTSPVMIPFLKALDSMQKPKAKLDVQVKLFVVPANPKQKEIPFARVNHNKYMVTDKV
AYIGTSNWSGDYFVNTAGSALVVNQTAAQSVEPTVQAQLQAVFERDWDSGYSTPIHQHTD
LKMVC
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgatattccctacgagaagatgtgtaatgtggagtcgaggagagaagagtcc
tgcaggaaagcacagatgtattataggtgtctgctgggtctcactggggtggtcagtctg
ctattggctgccgtgttcctccagaccctgctgcttcccgtggttaactcctccccaaac
aagcccggcttccagctcccacttcctctcactgacacctgcaccgacccctgcaaaatc
gttctattggagagcatcccagaggggttagagttcaattctagtgtcaccaacccatcc
atctaccaggcttggctaaacctgattagtgaggctcgcagtagcgtggacattgcgtct
ttctattggacgctcaccaacaaagacacaggctctcatgagccaacggcggataagggt
gaggatgtcctgaataggctagctcaggtgtctgggaagctctctgtccgcatcgctgta
aatacaccaacagagtcccaacatcacgaagacctcaatctattacaaagttctggtgct
gatgtaagagccgtgaacatgcgggatttgaccactggagtacttcacaccaagttctgg
gtggtggacaagaagcacatctacattggcagtgccaacatggactggaggtcccttacc
caggtgaaggagctgggggctgtggtgtacaactgcagctgcttggctgcagacctgggg
aagatcttcgaggcctactggtaccttgggcaaaaagacacacccatcccgtccccttgg
cccagcagtttcaacactctttacaataaggactctcccctgcagttaccactcaacggc
acagcctcccacgtgtatctgacgagttctccaccatctttctgtgctgctgggaggacc
ggagacctgcagtctattctcagtgtgatggaggatgcacaggagtttatctacatcgct
gtcatgaactacctgcccaccatggagttctcgcgacccaaacggtactgggcagaaatt
gacactcagatcagacgtgtggcatacgagaagcgggtgaaggtgcgtctgctcatcagc
tgttgggccagcacttcgcctgtcatgatccccttcctgaaagccttggattcaatgcag
aaacccaaggccaagctggatgtccaggtgaaactctttgttgtgccagccaatcccaag
cagaaagaaatcccctttgccagggtcaaccataacaagtacatggtgacggacaaggtc
gcctacataggtacctctaactggtctggagactattttgtgaacactgctggatcggct
ctggtggtgaaccaaacggctgcccagtcagtggagcctacggtccaggcacaactacag
gccgtgttcgaaagggactgggactccggctacagcaccccaatccaccagcacaccgac
ctcaaaatggtgtgttag
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