Oncorhynchus tshawytscha (Chinook salmon): 112266485
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Entry
112266485 CDS
T05605
Name
(RefSeq) actin-related protein 3
KO
K18584
actin-related protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04530
Tight junction
otw04810
Regulation of actin cytoskeleton
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112266485
09144 Cellular community - eukaryotes
04530 Tight junction
112266485
09142 Cell motility
04810 Regulation of actin cytoskeleton
112266485
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112266485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112266485
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112266485
04147 Exosome [BR:
otw04147
]
112266485
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Arp2/3 complex
112266485
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
112266485
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112266485
Exosomal proteins of other body fluids (saliva and urine)
112266485
Exosomal proteins of bladder cancer cells
112266485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
FtsA
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
112266485
NCBI-ProteinID:
XP_024299748
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All DBs
Position
LG14:complement(8971009..8983834)
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AA seq
418 aa
AA seq
DB search
MAGRLPACVVDCGTGYTKIGYAGNTEPQFIVPSCIAIKESAKVGDQAQRRMTKGVDDLDF
YIGDEAIDKPNYATKWPIRHGIVDDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQLGERTLTGTVIDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAIKERFSYVCPDLVK
EFNKYDTDSSKWIKQYTGINSISKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDGRLKLSEELSGGKLKP
KPVDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgtctaccggcttgtgtagttgactgtggcacagggtacacaaagattgga
tatgctggaaacacagagccacagtttattgttccttcatgtattgccatcaaagagtcg
gccaaggttggagaccaagcccagcgcaggatgacgaagggggtggacgatctggacttt
tacatcggtgacgaggcaatagacaaaccaaattatgcaacaaagtggcccattcgtcat
gggatcgtggatgactgggatctcatggagaggttcatggaacaggtcatcttcaagtat
ctgcgggcagagcccgaagaccactacttcctcttgacagagcctcctctgaatacccct
gaaaaccgagagtacacagcagagattatgtttgagtccttcaacgttccaggtctttac
atcgctgtacaggcggtcctggcgctggcagcctcatggacctccagacaattgggcgag
aggaccctaacggggacggtgattgacagcggtgacggggtcacccacgtcatcccagtg
gcagaaggctacgtcatcggtagctgtataaagcacatccccatcgctggtcgagacatc
acctacttcacccagcagctgctgagagagcgcgaggtgggcatcccaccagagcagtca
ttggaaacagccaaagccatcaaggaaaggttcagttatgtctgccctgacctggtgaaa
gagttcaacaagtacgatacggacagctctaagtggatcaagcagtacacggggatcaac
tccatcagcaagaaggagttcaccatcgacgtgggctacgagcgcttccttggccctgag
atcttcttccacccagagtttgccaaccccgacttcacccaacccatctccgaggttgtt
gatgaagtcattcagaactgccctattgacgtcagacgtcccctctataagaacattgtg
ctctctggaggctccactatgttcagagactttggccgacgtctgcagagggacctgaaa
aggacagtggatggcagactgaaactcagtgaggaactgagcggtggcaagctgaagccc
aaacccgtcgacgtgcaagtcatcactcaccacatgcagagatatgctgtttggttcggc
gggtctatgttggcatcaactccggagttttaccaagtgtgccacaccaaaaaagactat
gaggaaatcggaccgagcatctgccgccataaccctgtcttcggggtcatgtcttaa
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