Opisthorchis viverrini (Southeast Asian liver fluke): T265_03243
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Entry
T265_03243 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K08526
retinoid X receptor gamma
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovi03000
]
T265_03243
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ovi03310
]
T265_03243
Transcription factors [BR:
ovi03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
T265_03243
Nuclear receptors [BR:
ovi03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
T265_03243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
20317430
NCBI-ProteinID:
XP_009165940
UniProt:
A0A075AHQ5
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MRVNVMKPDPEPINYASSFSEQCDSGRFSLSCSTDVKPNAVQGLKPVYSVNPQGIILNSQ
YRPTQIVDYHLSESPVLHGSRESLTQTYHPPVPNTVVSSVHAFPEHTDALETIQSHLSAY
SASAQNGAPVNLSVQTGVMMDATSDGMAQSAAATRPNHGLSSPSMRCTRTNSLSQEPFPR
SLAPLGPVAPAADTPTVPTICVICGDRASGRHYGVVSCEGCKGFFKRTVRKQVQYVCRGS
GDCPVDRRKRTRCQACRYDRCILKGMKREAVQEERHRYTRVSIPKLPTLDATANNSTPLS
QASFVDHKLSDDSAFSGSPSVSFPTGSSGSSQNNSTEAANEPTGRPLLPPVTTLTCLPEL
TLSSLLAAELSTDAELPTTEVGELVYVDIGEDNMDPLVVILHSVEEQLHRLLSWARQLPC
FSQPYLSVDDQFWLLKSAWPELLLISAAFNSIVVNEGLLLANGRHLSLSTARLHGLGPLM
DRFLTELVSRFRELGLERVELALLRAIILFNPDANHLVARTRVESIRENLYAGLHSYCVT
GHASDTSRFTKLLLRLPPLRSIAQKCLEHLVFVKLAAEDPTSRRLINLVEHGVWPSREQS
SQSFEPNGKMNNINL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtaaacgtgatgaaaccagatccggagccaataaactacgcatcaagtttctca
gaacagtgtgatagtgggagattcagcctgtcatgttctactgacgtcaaaccaaatgct
gtgcaaggtttaaaacctgtctacagcgtgaatccacaggggattattttgaacagccag
tataggccaactcagatagtggactaccacctgtccgaatcgcctgtgcttcatggaagt
agagaatctttgacacagacttatcatcctcctgtgcctaataccgtcgtttccagtgtt
cacgcctttccagagcatacggatgctttggaaacgattcagtctcacctttcggcctat
tcggcatcagcgcaaaatggtgcacctgtgaatttatccgttcagacaggagtaatgatg
gacgcaacttccgatggtatggctcaatctgctgctgcaactaggcccaaccacgggctt
tcctctccctctatgaggtgtacacgtacaaactcgctgtcacaggagcctttcccaaga
tctcttgccccactcggtcctgtcgctcccgctgctgatactcccactgttcccactatc
tgcgttatttgtggagaccgagcaagtgggcgtcactacggcgtcgtatcttgtgaagga
tgtaaggggtttttcaagcgaacagtacgaaaacaggtccagtatgtttgtcggggttct
ggagactgtcctgtggacagacgtaaacgtacccgatgtcaggcttgtcgttacgaccgg
tgcatcttgaagggtatgaaacgagaagctgttcaagaagagcgccatcgctacactcgt
gtgagcattcccaaacttccaacgctagatgcgactgccaacaactcgactccgttatca
caagcttctttcgtggatcacaaactgagtgatgattcggctttttccggttcaccttct
gtctcgttccctactggcagttctggtagttctcaaaacaactcgacggaggcggcgaat
gaaccgactggtcgacctctcctccctccagtcacaacactgacttgcttgccagaattg
accttgtccagtttattggctgcggagctcagcacggacgcagaacttcccacaaccgaa
gttggtgaactggtctatgttgatattggagaagacaacatggatcctttggttgtgatc
cttcactcagtcgaggaacaattgcatcgcctgctcagctgggcccgtcagttgccgtgt
ttctcacaaccgtacctgtctgtagatgatcaattttggttgctcaaatcggcctggcct
gaattactcctgatcagtgccgcatttaactctatcgttgtcaacgaaggcctacttttg
gccaatggacggcatttgagtctgtctactgccaggctgcatgggctaggtcctttgatg
gatcgctttctgacggaacttgtctcgcgttttcgggaactgggtctggagcgcgtggaa
cttgctctgctccgagccatcattctgtttaatccagacgcaaatcatctcgttgctcgc
acccgcgttgaatccattcgagaaaatctctacgcaggtctgcattcctattgcgtcaca
ggtcacgcgagtgacacttcccgtttcacaaagcttttattacgactcccgcccctccga
tcgattgcgcaaaagtgtttggaacatttggtatttgtcaaattggccgccgaagatcca
accagccgtcgcctgatcaatcttgtcgaacatggtgtgtggccatctcgtgaacaatca
tcacagtctttcgagccaaacggaaaaatgaacaatatcaacctgtga
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