Opisthorchis viverrini (Southeast Asian liver fluke): T265_03325
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Entry
T265_03325 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
T265_03325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_03325
03036 Chromosome and associated proteins [BR:
ovi03036
]
T265_03325
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
T265_03325
Chromosome and associated proteins [BR:
ovi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
T265_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
20317512
NCBI-ProteinID:
XP_009166050
UniProt:
A0A075A3R3
LinkDB
All DBs
Position
Unknown
AA seq
2304 aa
AA seq
DB search
MFGAPKSTFGAPASSAFGQTTNTLFGAATKPTNLFGQPSVGLGGSGTTSLFGGGTTQQNT
ITWGSGATMAATASSGTAIAFNPPVTPDTIQRGGQQTQVNAKHMCITAMKEYQDKSLEEL
RLEDYVLNRRSGNALATATTGTSLFGTSATVKPFQFGASQTTTTASSIFGQTNKPTSSLF
GGSGLSFGASSTTTQPVFGQPAQTQGSLLGVKPQFGTTQQSTNLFGAAAPAQTSGFTFGQ
TAQTNSPFGTKPLFGGTTGVTGGTGLFGTAQQASTGTTGFTFGQPQATGLGATTNLFGQT
ATSTAATGGQLNLFGAQPSSSSVLPFGSTQQTTNLFGAVKTTGAAPLFGTPSTALGTTQQ
TGFGAFGGLKPGGTTSLFGAATSTATSKPGGIFGIGAASNTSTGFGFGAATATGQTPAFG
AFGAGTSTTGLFGQTNANTLAAKKPFEFGSSLTNPTVSSTGLFGFGQTTSQAGGLFGGAS
IGSTALGLGSAAGGTGTLFGQTTGFGSLQKPAAPGFGPGFGLGGGTGLGAGGLFGTTSTA
LGSLSSAAQPLGSGFGGIGTLQSSSITGGLTGLSNTTAEQFAQNVRAQQQVLDLVRSMPY
GQSSLFRYLNMPGTSETGTEDVTKQCAGTESNSGAVVPARAAASALAQQHKAAGLTLGTG
SPSSLVAGIVGRGTRLRQPSFTQRILKVSNRSKLFSGFYEDDAFLSPSGQNVSPALRLRR
SSTLSDGTSLFGSPDPNNKGSFFVRRDDWRRLHLPESVRTSILERSAVSSQAFTDIAENS
LNGDHTSEAPATEMSESAEHRFGARAAGDTTPNINANRSTSVPHTTTPLTPSTDSGRSES
HTAGVAKLSVPFQRGLGMARAREALQTAVAEDSVVLDDLETTWTSPVDMTNSEQWTLNAT
AKSPVASPKPKCGESEPRAPSSTVKNSKAVLKLTKPGYYTLPTLEELEALVDSEGQCVVE
DFVVGRRHYGHILFPGNTELTDLDLDSIVHIRRREVVVYPDDEKKPPVGCGLNKRAEICL
ESIWPTDKATREPIKSPERLGLMRFEERLERATRRMDARFIEYRPESGSWVFEVKHFSKY
RLEDSDNEDVDVFVPKTTTTTESPQVDSKLPQSKDEYIKTAVLQTRTTTTTPQLKAVGAL
ITEADSDMRFSPTHFGSFTFKDSTGLGLKTMELTNLTPDTTTIQEDDARSVSASVKQMRD
VFFSPVFIPKVKPGRASSVLYRHGTGELSDEADEFEAAEYSAVWPIAGTKRFQASQSPEL
PLSQTGDMAWVGQAGGDSQFCPASGMLGRTHIRTATIPSKRERLSDDSDESAVSDEPITS
RASFRPIPYEPFSDGVPLSTTAVPPITSGLHLARIPAQLKSVNELFSGVGSELKPCVYPY
FALSKCISDQTMARSVKTSSKTRSIATKLFSSMLIDVGLNRGHGFRPCWGQIRFRELHTV
VLATVTPAVRGSGAFNVSFSSWPSLIVQDDEDLLNTAMSTSECTTLSGSSEDPELQPPVD
HCPQWQPVSGLKPLETYASTLQCTFPQMFESSEELKKPRTLVLCRLISLCMALWGRHPQE
VASHAVVGGGFQKPDKDGTGETSECELTPEQLVPDNLESATEDDAENQLSEDNPPQHHTE
SRYILQLARKQALSEWIRAQSFPWLKNLLTSLGLFDSVKDLHTASSNSLAKSVSIDRIAH
GIFACLVAGEPGAGCRLALSAGMPELATLVAQSSSGDPVVRRCLQHQLLAWHQTEYDGCI
PLEVLRIYALLAGQPRIPHPKVHDAFIEVLEQLDWIRVFGAHLWYLTDYTADLAEVLRIY
SAFWHSINSTCSSAKLSRPTPPHQRDLISPPKAPSLPTDFPTVPGKDDIVGFRNWPRDSA
YHLIQLFCHTTHSLERTLDPCSISRFEPSAADEPTCRSSPDSLLDWSASWHLWRTLHALG
YRHFSSPSSVSRICGEFASQLEDAGLWEWAIFVLLHLPDQTMRDACVKAVVARHASLVIP
IEQTGVAEEDSREYGRFLGSVSRLLNSFKLAPPPSLTRAEQFVVKLGVPSRWIYEAKAIL
ARQRFNECNRGFTPDQLVLNSRNAADYAGLRLRARLFALLETAHWFASGYYGEAQKVCVE
YLLPDIVLHTNLSIACGCVGPSVGTGLFLSVTRLGHQLNRLLSPYRTLSTGHLPCRFEEG
VGVYLRYSDILCLADELAALYQSRSNTQPPDADQSDENNETDESESRARLALVLSNLNTQ
LDTFMGQLHLMDTPNLNSRVVKTEIAVTCAKMISAFLSGLDPQSDMLVHLRRHLMSLVKI
NLPADYRLQELSTLSEAELSLGAF
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagcgccaaaatccactttcggagccccggctagctctgcattcggtcagaca
acaaatactttgtttggggctgcaaccaagccaaccaatttgttcggacaaccttctgta
ggactcgggggtagtggcaccacttcacttttcggtggcggtacaactcaacaaaacacc
atcacctggggcagtggtgcaacgatggcagccacagcttctagcggaacagcgatcgca
tttaatccgcctgttacaccagacacaatacaacgtggtggccagcaaactcaagtgaac
gcaaagcacatgtgtattacagctatgaaggaatatcaagataaaagcctggaagaactg
cgtttggaggattatgtcttaaaccgcaggagtggtaatgcactcgcgacggcgacaacg
ggcacatctctcttcggtacctcagccactgtcaaacctttccagtttggtgcatctcaa
acgacaactaccgcatcatccattttcgggcaaacaaacaaaccgaccagtagtttgttc
ggaggatctggcttgagctttggcgcttccagcaccaccacacagcccgtttttggacag
ccagcacaaactcaaggaagccttttaggtgtcaagccacagtttggtacaacacaacag
tcaacgaatttgtttggagcggccgcaccagctcagacatcaggattcacttttgggcag
acagcacaaacaaattctccgtttggcacaaaaccgctgtttggcgggactactggtgta
acgggaggcacgggcttgttcggaactgctcaacaggctagtactggtaccacgggtttc
actttcggtcagcctcaggcaactggtctgggtgctactacgaacttgttcggtcagacg
gcaacttctacagctgccacaggtggacaacttaacctctttggtgcgcagcccagcagc
agttctgttcttccttttggttcaacgcaacaaactaccaatctgtttggagcagtcaaa
acgacaggtgccgccccactttttggaacaccttccactgccctaggtacaacacaacaa
acaggttttggcgcttttggtggcctaaaaccaggcggtacgactagtctcttcggtgca
gccacgtcaactgcaacatccaaacctggaggtatcttcggcattggtgccgcctctaat
acatctaccggcttcggttttggcgctgcaaccgctactgggcagacaccggcgtttggc
gcttttggtgcgggcactagtactacaggactatttggacaaacaaatgccaatactttg
gctgccaaaaaacccttcgaatttggctcgtcgcttactaatcctacagtgtcctccacc
ggtctgtttggtttcggtcaaactacttcccaggcgggaggtctttttggcggcgctagt
ataggttcaacagctttgggtctcggttctgcggctggtggcaccggaactctttttggt
caaacaacgggattcgggtcattacaaaagcctgctgcgcctggattcgggcccggattc
ggtttgggtggcgggacagggcttggcgctggtggtttgtttgggactacgtcaactgcg
ctaggatctttatcgtcagccgctcaaccgcttggttctggatttggaggaattggcacg
ttacagtcgagttcgattaccggtggtctcactgggctcagcaacaccaccgctgaacag
tttgctcaaaatgtcagagctcaacaacaagttctagatttggttagaagcatgccttac
gggcagtcttcattgtttcggtatctcaacatgcctggaacatctgaaacagggacagag
gatgtgacgaaacagtgtgcaggcacggagtcaaattctggtgctgtcgttccggcccga
gctgcggcgagcgctctggcccaacagcataaggccgctggtctgacacttggaactgga
tctccaagttcacttgttgccggtattgtcggtcgtggtacacgactgcgccagcctagc
ttcacacaacgtattctgaaagtttcaaatcgtagcaaactgttctctggcttttatgaa
gatgatgctttcctgtccccgtctggacaaaatgtctcaccagccttacggttgcgtcgt
tcatcgacgcttagcgacggtacttcacttttcggcagtccagaccccaataacaaaggt
agtttctttgttcgacgagacgattggaggcgtctccacttgccagaaagtgtgcgaaca
tctatccttgagcgatcagcagtttcatcacaggcgttcaccgacatagccgagaactcg
ttgaacggagaccatacctccgaggccccggctactgagatgtcggagtcagctgaacat
agatttggtgcacgtgctgccggtgacactacccccaacattaacgccaatcgctcaact
tccgtcccccatacgactaccccgctcaccccttcaactgattcgggacgttcggaatcg
catactgctggcgtggctaaactctcagtacccttccaaaggggattaggtatggctcga
gctcgtgaggctcttcaaacagcggttgccgaggactctgttgttctagatgatctagaa
acaacctggacatctcccgtagacatgacaaactcagaacagtggacactgaatgcgacg
gcgaaaagtccagtggcaagtccaaaaccgaaatgcggtgaatcagaaccccgtgcacct
tcaagtacagttaagaactcaaaggctgttttgaagctaacgaagcccggatactacacc
ttacccactttagaggaactggaggcattggttgactccgaaggacaatgtgttgtcgag
gatttcgttgtcggacgacgccactatggacatattttgttccccggcaatacggagcta
accgacttggacctggatagcatcgtccacattcgtagacgcgaggttgtcgtctatcca
gatgacgagaagaaaccaccggtcggatgcggtttgaacaaacgagccgaaatatgccta
gaatcgatatggcccacggacaaagctacacgagagccaatcaagtcaccggaacgattg
ggtttgatgcgttttgaggaacgactggaaagagcaacacgacgcatggatgcaaggttc
atagaatatcgaccggaatccggctcttgggtatttgaagtgaaacacttctcaaaatat
cggttagaggactctgacaacgaggatgtggatgtgtttgttccaaagacaacaacaacg
accgaatcgcctcaagtggattcgaaactacctcaatcgaaggatgaatacatcaagact
gctgtgcttcagacccgaacaacaacaacaactccccaactgaaggcagtcggtgcacta
atcacagaagcggactcagatatgcgttttagcccaactcatttcggttcattcacattc
aaagatagcacagggttggggttgaagaccatggaacttacgaacctgacaccggacact
actaccatccaagaagatgatgcacgttcagtttcagcttccgtgaaacaaatgcgcgat
gtcttttttagtccggtattcatccccaaggtcaaaccaggtcgtgcaagttccgtgctc
tatcgccatggtactggtgaactttcggacgaagcagacgaattcgaagccgcagaatac
tcggcggtttggcccatcgccggaaccaaacgcttccaggcctcccagtcaccagaactt
cctctttctcagactggtgatatggcttgggtcggacaagcaggtggcgattcacagttt
tgtcctgcttcagggatgctaggccgaacacacatacgtactgccactatcccttccaaa
cgggaacgcttaagcgatgatagtgatgaatctgctgtttccgatgaaccgattacgtct
cgtgcgtctttccgacccattccatacgagccgttctccgatggcgttccgctgagcacg
acagctgttccaccgattacctcaggattgcatctagcacgcatccccgcacaattgaag
tctgtcaacgaactattttcgggtgttggctctgaactgaaaccatgtgtctatccgtat
tttgcattgtctaagtgcatctcagatcagacaatggcccgatctgtgaaaacgtccagt
aaaactcggtctattgctacaaaactgttttcttccatgctgattgatgtaggtttaaat
cggggccacggctttcgtccttgctggggacaaatccgcttcagagagttacatactgta
gttctcgcaactgttacccctgcagttcgtggttctggagcctttaatgtgtccttcagc
tcttggccttccctgattgtacaagatgacgaggatctcctcaacaccgcaatgtctaca
tcagagtgtacgacactctctggttcttcagaagatccggaacttcagcctccggtggac
cactgcccgcaatggcagccggtctcgggcctcaaacctttggagacgtatgcaagtaca
ctacagtgtaccttccctcagatgtttgaatcgtctgaagagttgaagaaaccccgtact
ctcgtcctctgccgtttgataagcctgtgtatggctctttggggtcgtcatccgcaagag
gtcgcttcacatgccgtagttggaggggggtttcagaagcctgataaggacggtactggt
gagacgtctgaatgtgagctcactccagagcagttggttccagacaacttggagtctgcc
actgaagatgatgccgaaaaccaactcagtgaagacaatcctccccaacatcacactgag
tctagatacattctccagcttgctcgaaaacaggccttgtctgagtggataagggcccaa
tccttcccatggctgaagaatctgttgacctccttggggctgtttgatagtgtgaaggac
cttcatactgcttcatcgaattcacttgcaaagagcgtttcaatcgaccgcatagcgcat
ggtattttcgcttgtctggtcgctggggaacccggtgcaggatgccgccttgcattatct
gcagggatgccagaacttgcgacccttgttgcgcaatcatcttccggtgaccctgttgtc
cgtcgctgtttgcagcatcagttgctcgcatggcatcagacagaatacgacggctgcatc
cccttggaggtccttcggatctatgctcttttagccggccaaccgcgcattccccatccg
aaagttcatgacgcttttatcgaggtgttggaacaactagactggatacgcgtgtttggt
gcgcacttatggtatctcaccgattacactgctgatctggcggaggtgctgcgtatctac
agcgcattctggcactcaatcaattcaacgtgctcatctgcgaaattatctcgacccacc
ccaccccaccaacgtgatcttatttcgccaccgaaagcgccatcccttccgacggatttt
ccgacagttccgggtaaagatgatatcgtcggtttccgcaattggcctcgcgatagtgct
taccatttgattcagttgttttgccacacgacccactcattagaacgtacactggatccg
tgctccatcagtcgattcgaaccgtctgcggctgatgaaccaacatgtcgttctagtcca
gacagtctgcttgactggagtgcttcgtggcatctctggcgtacgcttcacgccttgggc
tatcgacatttttcttctccctcttccgtgtcccgcatatgcggggaatttgcttcacaa
ttggaagatgctggattgtgggaatgggccatctttgtgctgctccacttgcctgaccaa
accatgcgagatgcatgcgtgaaggccgttgttgctaggcatgcttcacttgtcatcccg
attgaacaaactggtgtggcagaggaggactctcgtgaatatggacgttttttggggtcc
gtgagtcgtcttctgaattcgttcaaactggccccaccgccgagcttgactcgcgcagaa
caatttgttgtcaagttgggcgtacctagtcgatggatttacgaagccaaagccattcta
gctcgtcaacgctttaacgaatgcaatcgtgggttcactccggaccagctggtcttaaac
agccgtaacgcggcggactatgctggtctacgtttacgcgctcggttgttcgctcttttg
gaaaccgctcactggttcgcttccggttattacggggaggctcaaaaggtttgcgtggaa
tatctcttacccgatattgtgctgcacaccaatctctccatcgcatgtggctgtgtgggt
ccatcggtcggcactggcttatttctttcggtcacaagattgggacatcagttgaacagg
ctgcttagcccttatcgtaccctttcaactggacatttaccttgtcgtttcgaggaaggt
gttggagtctaccttcgatacagcgatattctgtgtctggcagatgaactggctgctctt
tatcaaagtcgctctaacacgcagcctccagatgctgaccagtctgacgagaacaatgag
actgacgaaagcgagtcacgggcacgcctcgcactcgtcctgagtaacctgaatacgcag
ttagacacttttatgggacaattacatcttatggataccccaaacctgaattccagggtt
gtcaaaaccgaaatagcagttacttgtgccaagatgatctccgcgtttctatcaggattg
gatccgcagtcggatatgcttgttcatctccggcgtcatttgatgtcgttggtgaaaatc
aatttgccagcggactatcggctacaagagctgagcacgctcagtgaggctgaactgtcc
cttggtgctttttaa
DBGET
integrated database retrieval system
