Opisthorchis viverrini (Southeast Asian liver fluke): T265_05921
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Entry
T265_05921 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K19720
collagen type III alpha
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ovi00536
]
T265_05921
Glycosaminoglycan binding proteins [BR:
ovi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
T265_05921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
20320103
NCBI-ProteinID:
XP_009169320
UniProt:
A0A074ZIW8
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MTQQSSEAVSGSLLRCRKSQILLLFTVLSFLLSNPCTVTGEPVRVKRQNDDPLSEDVSVG
GADEENEAATPVPSVKGPGPFLQPPVVTGPRGPAGEPGLPGPPGPPGPPGKIGEPGPPGP
AASDGVRGPPGPPGDPGLDGKPGQDGDPGLPGNQGPRGPLGPIGMIGANGMQGPMGPPGP
KGSKGASGASGAVGERGETGIPGPMGQPGVKGPLGLPGPQGPVGPTGFQGSDGLIGPMGP
FGPQGPPGSTGMMGPVGLKGDDGPSGAAGAAGDPGEPGPDGKAGPPGERGAPPVYGVFAL
AKGDRSLKRTRGQSHLPYHPEISGFCWKRRTIWTERRTWKPRANGTSRIYRNAWTSGWGW
CTRFYWTKRFPRHSRPHXPRGSTGMRGPPGGAGAQGSIGPKGSQGIPGPQGPTGPPGPMG
PPGDMGDMGPFGPVGDMGKQGPRGPMGERGPKGDTGMVGAPGMPGNPGLDGLPGKPGDQG
KDGEPGRPGLRGPTGLPGAPGKDGEPGPQGYQGQKGMDGASGLPGGIGLRGPPGKPGDDG
EIGAAGPPGPPGPPGPSGAPGPRGNRGIVGDSGEMGAPGEQGSRGTPGTRGRRGKIGPPG
QQGQTGLSGERGPPGPIGPAGEQGASGPPGAPGGKGPTGRDGKVGSDGKPGSRGLAGLPG
SVGERGPPGPEGEPGYVGLAGPKGEPGAQGSPGRIGIAGSPGIRGNVGAMGMRGDKGPRG
PPGEDGIRGEDGEQGEMGPPGEPGPRGPYTLQGVSQQLLLGPKGEKGQPGYPGPRGRPGI
PGPPGDPGEAGDTGTPGEDGPVGLEGPRGRDGMDGRPGRPGKAGKPGPRGAAGLQGPEGK
PGDRGNPGPPGPSGIPGAPGEPGLPGLDGVNGTVGSPGAVGPVGAPGPRGPVGPPGIDGL
KGPPGDDGPVGSRGQVGPRGASGTDGSPGAQGKMGAPGRPGPVGPPGSMGIPGPQGKPGP
AGKEGPPGISGPAGQPGPNGVDGEVGPMGPAGEPGPPGQQGLIGERGPQGQPGPAGEKGP
PGPSGPPGIPGPTGPSGGRGDAGEPGPDGAPGERGDDGPQGFAGRPGIDGAPGRQGKPGP
AGHKGWTGPPGDPGQPGNPGQTGQPGLRGYPGPSGLPGEPGPAGLPGLPGEAGFMGEPGP
IGPAGPIGRDGPQGLAGPIGSEGPPGPPGPPAVGYSKMFGDESMLSLHMPNGSQRYPARS
CRHLSAAYPQFPDGFYWIDPNGGIANDAVEVFCRLRTGETCLQPKTASYPQTSMSSAEVG
DVIWFSQITGQSRFDYEISQDQLNFLKMLNAKASQQITLVCSELSFSEGVHSVRFFSDND
REFTEDGPLLRYEKLDNGCQYASPNGKSTFEVHTRAQRLPIRDVILPNPKISGREAVGVE
LGRVCFQ
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacagtccagcgaagcagtttctggcagtctgttacggtgccgaaagtcccag
atacttttattgttcactgtattaagctttctactcagcaatccatgtacagttacgggt
gaacctgtgcgtgtcaaacgacaaaacgatgatcctttatccgaagatgtttcagtaggc
ggagctgatgaggagaacgaagcagcgacacctgtaccaagtgtgaaaggaccaggaccc
tttcttcagccaccagtcgtgacaggtcctcgtggtcccgccggtgaaccggggctgcca
ggtcctcctggtccgcccggacctccagggaagattggagaacctggcccacccggtcca
gcagccagtgatggagtccgtgggcctccagggccaccaggtgatcctggacttgacggc
aagcctggtcaggatggagaccctggccttccgggaaatcaagggccacgtggaccgctg
ggaccaatcgggatgatcggtgcaaacgggatgcaaggaccaatgggaccacctggtccc
aaaggaagcaaaggagcttcaggagcttcgggagcagtgggtgagcgtggagaaactggc
atacctggaccgatgggtcaacctggtgtgaaaggtcctctcggactacctgggcctcaa
ggcccggtcggtccaactggttttcaaggttctgatggcttgattggaccaatgggaccc
tttggtcctcagggtcctcctggatcaactggaatgatgggtccggttgggttgaagggc
gacgatggtccgtccggtgccgcaggagctgccggtgaccccggagaacccggaccagat
gggaaagcaggtccccctggagaacgaggggccccgccggtatacggtgtattcgcgttg
gctaagggtgatcgttcgttgaagagaacccgcggtcaatcgcatctcccatatcatcct
gaaatttcagggttttgctggaaaagacggacaatctggaccgaaaggagaacgtggaag
cccagggccaatgggacctcgcggatctacaggaatgcgtggacctccgggtggggctgg
tgcacaaggttctattggaccaaaaggttcccaaggcattcccggccccatcnacctcgc
ggatctacaggaatgcgtggacctccgggtggggctggtgcacaaggttctattggacca
aaaggttcccaaggcattcctggcccacagggacctacaggacccccaggacccatgggt
cctcctggggatatgggcgatatgggtccttttggaccagtcggtgatatgggcaaacag
ggtcctcgtggtccaatgggggagcggggaccgaagggtgacactggcatggtgggtgca
ccagggatgcctggaaatcctggactggatggactgccaggtaaacctggggatcaaggt
aaagatggagaaccaggtaggcctggactaagaggacctactggactacctggagctcct
ggaaaagatggtgaacctggaccacagggatatcaaggccaaaagggcatggatggtgct
tcaggacttccaggaggtattggtttacgaggtcctcctggaaaacctggagatgatggt
gaaataggtgcggctggacctcccggaccacctggaccacctggaccttcgggagcacct
ggcccacgaggaaaccgaggaattgttggagatagcggtgagatgggtgcacctggagaa
caaggtagtcgtggaactccaggaacgagaggacgtcgtggaaaaatcggtccaccagga
caacaaggacaaacaggtctttcgggcgaacgagggccacctggacctattggccccgcc
ggtgaacagggggccagcggaccgcctggagccccaggtgggaaaggaccgacaggaagg
gatggtaaagttggaagtgatggaaagccaggtagtcgtggtctagcaggacttcctgga
tcagttggggagcgtggccctccaggaccagaaggcgaacctggttatgtagggctagcc
ggaccgaagggagaacctggcgcacaaggttcacctggtcgcatcggtattgctggctcg
cctggtatccgcggaaatgtcggagcgatgggaatgcggggtgacaagggcccccgaggt
cctccaggtgaagatggaattcgcggagaagatggtgaacagggtgagatggggccacct
ggagaacctggcccacgcggcccctacacactgcaaggtgtgtcccaacagttattgttg
ggaccaaaaggagagaaaggtcaacctggctacccaggtccaagaggtcgacctggaatt
ccaggtccgcctggtgacccgggtgaggcgggagacactggtacacccggagaagatggt
ccagttggccttgaaggaccaagaggacgtgatggtatggatggacgacccggacgtcca
ggaaaagccggaaagcccggtccacgtggggcggctggcttacaaggacctgaagggaaa
cctggagatcggggtaacccgggtccaccgggtccctctggcattccaggtgctccgggt
gaacctggacttcctggtctggatggtgtcaatggaaccgttggttcgcctggagctgtt
ggtcctgtaggtgctcctggtcctcgaggtcctgtggggccccctggaatcgacggattg
aaaggcccaccgggagacgacgggcctgttggatcacgtggccaagttggaccaagaggc
gcttccggaacggatggttcaccaggagcccagggcaaaatgggtgctccaggacgtcca
ggccctgtgggtcctccaggttcaatgggaattccaggtcctcaaggtaagcccggacca
gctggtaaagaaggaccgcctggaatttctggaccagctggacagccaggaccaaacggg
gtggatggagaagttggccccatgggtcccgcaggcgaaccaggacctccgggtcaacaa
ggtttaattggtgagcgaggcccgcaaggacagccaggtccagccggcgagaagggacca
cctggtccaagtggaccaccgggaattcctggaccaacaggaccaagtggaggccgcggg
gatgctggagaaccggggcccgatggtgcccctggagaacgaggggacgatggacctcaa
gggtttgctggccgaccaggaattgatggagcccctggccgtcaaggtaaacccggacct
gctggacacaaaggttggacaggacctcctggggatcctggtcagcctggaaatccagga
cagaccgggcaaccaggtttacgaggctatcctggtccatctggattgccaggtgaaccg
ggccctgctggtctacctggcctacctggagaagcaggtttcatgggagaaccgggacct
ataggtccagcgggtccaataggaagagacggaccgcaaggattggccggtccgattgga
agcgaaggacctccaggaccaccagggccaccggcagtcggttattccaaaatgtttgga
gatgagtctatgctatcccttcatatgcccaatggaagtcaaaggtacccagcccgttct
tgcagacatctttctgcggcttatcctcagttcccagacggattttactggatcgatcca
aacggtggcatagctaatgatgccgttgaagtattctgccgcttgcggactggtgaaacg
tgtcttcaaccaaaaacagcatcctatccccaaacgtccatgagttcagcagaagttggt
gatgttatctggttttcgcaaataactggacaatcaaggtttgactacgaaatctctcaa
gaccagttgaattttttgaagatgctcaatgcaaaggcttcacagcagatcactcttgtt
tgctcggaactcagtttctcggaaggtgttcactcagtacgatttttctctgataatgac
cgggaattcactgaagacgggcccttgctccgttatgagaaacttgacaatggatgccag
tatgcttcacctaacggaaaatccaccttcgaagtccacactcgtgcacaaagactaccg
attcgcgatgtgatcctacccaatccgaagatttccgggcgcgaggctgtgggtgttgaa
ctcggacgtgtctgtttccagtga
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