Opisthorchis viverrini (Southeast Asian liver fluke): T265_12857
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Entry
T265_12857 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_12857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_12857
03009 Ribosome biogenesis [BR:
ovi03009
]
T265_12857
Spliceosome [BR:
ovi03041
]
Complex A
U2 snRNP components
U2 related factors
T265_12857
Complex B
T265_12857
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
T265_12857
Ribosome biogenesis [BR:
ovi03009
]
Eukaryotic type
90S particles
Helicases
T265_12857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
AAA_23
AAA_25
SRP54
NACHT
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
20327025
NCBI-ProteinID:
XP_009164156
UniProt:
A0A075A8U5
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSSRHRIDIGESKPRKSRRSVVHLNGERYDELDLETFTDGPDGYSNRERSRSPERNNSKA
HMPIPTSYSVQVNPYNGKPFSARYFDLFRKRIQLPVWEYKENFFKVISENQVTVLVGETG
SGKTTQIPQWCLEWITGRYPTKKAVACTQPRRVAAMSVAQRVSEEMDVELGQEVGYSIRF
EDCTSSRTVMKYMTDGMLLREGMSDPLLEAYGVVLLDEAHERTLATDILMGLLKEIIKQR
LDLKIVVMSATLDAGKFQDYFLKAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIH
MCEEVEGDILLFLTGQEEIEEACKRIQREVEGLGPDVGELRCIPLYSTLPPNLQQRIFDP
PPPKRANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISK
ASAQQRAGRAGRTKPGKCFRLYTEKAYANEMQENTYPEILRSNLGTVVLQLKKLGIDDLV
HFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGSMMAEFPLDPQLAKMVIASCDFNC
SNEVLSITAMLSVPQCFVRPADAKKSADEAKMRFAHIDGDHLTMLNVYHAFKQNHEDPQW
CYDNFVNFRSLKSADNVRVQLSRIMDRFCLRRSSTDFSSRDYYLNIRKALVSGFFMQVAH
LERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTVTEVKPDWLVRIAP
QYYDMSNFPECEAKRLLERIVQRIQNKRLQQEQKQAQEAKAKVSA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcggcatcggattgacattggcgaatcgaaaccgcgcaagtccagaagatct
gttgttcatttgaatggtgaacggtacgacgaactagacctggaaacgtttactgatggc
ccggatggatattccaatcgtgaaaggtcgcggtcacctgagagaaataattccaaagcc
catatgccaattcccacctcttattccgtacaggtcaatccatacaatggaaagcccttt
tcagccagatattttgacctgtttcgaaagcgcatccagctaccagtatgggagtacaag
gaaaattttttcaaagtaatttcggaaaatcaggtcacagtcctggtgggtgaaaccggc
tcaggaaagaccactcaaataccacagtggtgtttagagtggatcactggccgttatcca
accaaaaaggcagttgcttgtactcagccgaggcgtgtagccgccatgtctgtggctcaa
cgtgtctcagaagaaatggacgttgagcttggtcaggaggtgggttacagcattcgattc
gaagattgcacctcctcccgtaccgtgatgaagtatatgaccgatggtatgctgttacgt
gaaggcatgtcagaccctctcctcgaagcctacggcgttgtcttgttggacgaggctcac
gagcgcacattggcaactgacatcctgatgggtttgctcaaagaaattatcaagcaacgg
ttggatttgaaaatagtagtcatgagtgccacactggatgccggaaagtttcaagactac
ttcctcaaagccccgcttatgacagttcccggacgtacacatccggtggagatcttctac
accccggaaccagaacgagattatttggaggctgctattcgaactgtgatacaaattcac
atgtgtgaggaagttgagggagatattctgctatttctgacaggccaggaggagatcgag
gaggcttgcaaacggatacagcgggaagtcgagggtttgggtccggatgttggtgaactt
cggtgtatacctctttattctaccctccccccaaacttacaacaacgtattttcgaccca
cctccaccaaagcgtgccaatggagcaataggaagaaaagtggtcgtatcaacaaacatt
gcagaaacgtcactcactatcgatggtgtcgtgttcgtgatcgatccggggttcgccaaa
caaaaagtctacaaccctcgcattcgtgtggaatctttgctggtaacagcgatcagtaaa
gcctcagctcaacagcgtgcgggtcgcgccggaagaacgaaaccggggaaatgtttccga
ctgtacaccgagaaagcctatgcaaatgagatgcaagaaaacacatatccagagatctta
cgatccaacttaggcacagtcgtactgcagttgaaaaaactaggcattgatgacctagtc
cattttgactttatggatccccctgccccggaaaccctgatgcgtgcgctggagttgttg
aactacctcgctgctctcgatgatgacggtaaccttactgacttaggcagtatgatggca
gaattccccctggacccccagttggccaaaatggtgattgcctcgtgtgatttcaactgt
tcaaacgaagtactcagcataaccgctatgctgtcagttccccaatgcttcgttcggcca
gcagatgcaaagaagtcggcagatgaggcgaaaatgaggttcgcacacattgacggtgat
catctcacaatgctcaacgtctatcacgcattcaaacagaatcacgaagatccgcaatgg
tgttatgacaatttcgtcaatttccgctcactgaaatccgccgacaacgtacgtgtccaa
ctgtcgcgaatcatggacaggttttgtctacggcgatccagcacggacttcagctctcgt
gattactacctcaacatccgaaaagcattagtgtctggtttcttcatgcaggtggcccac
ctcgaaaggactggacattatctaactgtgaaagacaatcaagttgtgcagctccatcct
tcaactgtattagatcacaaaccggaatgggttttatacaacgaatttgtgctgaccact
aagaactacatccgcacggtgaccgaagtcaaacctgattggcttgtcagaattgctccc
cagtattacgacatgtcaaatttccccgaatgtgaagccaaacgcctcctagaacggatc
gttcaacgaattcaaaacaagcgacttcagcaagaacaaaagcaagctcaagaggccaaa
gccaaggtgtctgcatag
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