Pyrococcus abyssi: PAB0190
Help
Entry
PAB0190 CDS
T00024
Name
(GenBank) Putative ATP-dependent ERCC4-like helicase
Organism
pab
Pyrococcus abyssi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_helicase_helical
ERCC4
DEAD
Helicase_C
ResIII
HHH_2
HHH_5
HHH
SWI2_SNF2
SNF2-rel_dom
UPF0758_N
HHH_3
Helicase_C_2
nSTAND3
UDI
Motif
Other DBs
NCBI-ProteinID:
CAB49203
UniProt:
Q9V1Z5
LinkDB
All DBs
Position
284951..287209
Genome browser
AA seq
752 aa
AA seq
DB search
MNTMYLRKELLQPRLYQELIYAKCKERNCLIVLPTGLGKTIIAMMIADYRLNKYGGKVLM
LAPTKPLVLQHAETFRKFFNLPPEKIVALTGEVSPSERVKAWNRAKVIIATPQTVENDLL
TGKINLEDVVLVIFDEAHRAVGNYAYVYIAREYLNQAKNPHVIGLTASPGSSQEKILEVL
RNLGIEHIEYRSENSPDVKPYVQGIKFEWIKVELPGLYKEVRKLLRDMLRDSLKPLAEAG
LIESASADLPKKEILRAGQIINEETAKGNHDLRKLLLFHAMALKLHHAIELLETQGLSAL
RVYLKKLYEEAKTGSTRASKELFLDRRMKKALALLIQAKELGIDHPKMEVLKELVKEQLS
KKENSKIIVFTNYRETARKVVEELTKEGIKAKRFVGQATKENDRGMSQREQKLILDSFAR
GEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSVQRRGRTGRQKPGRVVILIAQGTR
DEAYYWSSKHKERQMRETIRMVSQAIKREKQLSLESYVKKDTEKEMEREEKEERKGEREG
VKVVVDSRELRSEVVKRLKTLGVKIEVKTLDVGDYIISDEVAIERKSANDFIQSIIDGRL
FDQVKRLKDSYPRPVVIVEGQLYGIRNVHPNAIRGAIASIVIDFGVPIIFSSNPEETANY
IFFMARREQEERRREVRVRGEKKALTLAERQRLIVESLPHVSATLAKRLLKHFGSVERVF
TASVPELMKVEGIGEKIAREIRRVITSPYTED
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacgatgtacctaaggaaggagcttttgcagccaagactttaccaggaacttatc
tacgctaaatgcaaggagaggaattgcttgatagttttgccaactggattgggtaagacg
ataatagccatgatgatcgccgattataggttaaataagtacggcggtaaggttttgatg
ctcgctcccacgaagcccctcgttcttcagcacgcggaaaccttcaggaagttctttaac
cttccccccgagaagatagttgccctaacgggcgaggtaagtcccagcgagagggtgaag
gcttggaatagggcgaaggttataatcgcaacgccacaaactgttgaaaatgacctcctt
actggaaagataaaccttgaagatgtcgttcttgtgatatttgacgaggcccatagggcc
gttggaaattacgcttacgtttacatagcaagggagtaccttaaccaagctaagaatccc
cacgtcattggcctgacggcatcccctggtagctcccaggagaagatactggaagttcta
aggaatttaggaatagagcacatagagtatcgctccgagaattccccagacgttaagccg
tacgttcagggtataaagtttgagtggattaaggtggagctccctgggctttacaaggag
gttaggaaattacttagagacatgcttagggactccttgaagcctctcgctgaggccggt
ttgatagaatctgcctcggctgatcttcctaagaaggaaatcttgagggccgggcagata
ataaacgaggagacggcaaagggcaaccacgatctgagaaagctactcctctttcacgcg
atggcgttgaagcttcatcatgccatagagctcctcgaaacccagggcttatctgcctta
agggtctacctaaagaagctatatgaggaggcaaaaactggctccaccagggccagcaag
gagttattcctggacaggaggatgaagaaggcgttggcattgctaatccaggcaaaggaa
cttggcatcgaccatccaaagatggaagttctgaaggaacttgtaaaggaacagctctcc
aagaaagaaaactccaagataatagtcttcaccaactacagggagaccgcaaggaaggtc
gttgaggaattaacgaaggaaggaataaaagctaagcggttcgttggccaagcgacgaaa
gaaaatgataggggaatgagccaaagggagcaaaaactaatcctagattcctttgctagg
ggagaatttaacgttctagtagctactagcgttggcgaggaaggattggacgttcctgag
gttgatttggtagttttttatgagccagttccatccgcgattaggagcgtccagaggagg
gggagaacgggaaggcaaaagccaggtcgagttgtcatattaatagcccagggaaccagg
gatgaggcctactattggagctccaagcataaggagaggcagatgagggagacgataagg
atggtaagccaagcgataaagagggagaagcagctatcccttgaatcttacgtcaaaaag
gacacagagaaggaaatggaaagggaggaaaaagaggaaagaaaaggagagagggaaggt
gtaaaagtggtcgtggatagcagggagctgaggagcgaagttgtgaagaggctcaagacc
ttgggagttaagatagaggtgaaaactttagatgttggagactatataatcagcgatgag
gttgccatcgagagaaaatcagcaaacgacttcattcagtcgataatcgatggtagatta
tttgatcaggttaagaggctcaaggattcctatccaaggcctgttgtgatagttgaaggc
cagctctacgggataaggaacgtccatccaaacgccattaggggagccatagcttcgata
gttatagactttggagttccaattatattctcctcgaatcctgaggagactgccaattac
atcttcttcatggcgagaagagagcaagaggaaaggagaagggaagtgagggttagaggt
gagaagaaggccctaactttagcggaaaggcagaggttgatagttgagagcctcccccac
gtttcggcgacgttggctaaaaggctactcaagcacttcggaagcgttgagagggtcttc
acggcaagcgtcccagagctgatgaaggttgagggtataggggagaagatagccagagaa
attaggagggtaataacatccccttacaccgaggattaa
DBGET
integrated database retrieval system
