Salipiger abyssi: Ga0080574_TMP4395
Help
Entry
Ga0080574_TMP4395 CDS
T04681
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paby03032
]
Ga0080574_TMP4395
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP4395
Enzymes [BR:
paby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Ga0080574_TMP4395
DNA replication proteins [BR:
paby03032
]
Prokaryotic type
DNA Topoisomerases
Ga0080574_TMP4395
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ga0080574_TMP4395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
APZ54729
UniProt:
A0A1P8UZA7
LinkDB
All DBs
Position
3810013..3812757
Genome browser
AA seq
914 aa
AA seq
DB search
MTDTPEPPDNDDEMSGPERPAPSGPAISIIDEMKSSYLDYAMSVIVSRAIPDLRDGLKPV
HRRILYTLWENGQTKSKGYRKCATAVGDVMGRYHPHGDSAVYDALVRMAQDFSMSLPLID
GQGNFGSMDGDPPAAYRYTESRLERSAEALLEDIDKETVDFVPNYANERNEPVVLPARYP
NVLVNGAEGIAVGMATRIPPHNLGEVIDATLALIENPDLSSEQLIEYIPAPDFPTGGVIL
GRSGARKAYLEGRGSVIIRAKTRVEEIKRDRYAIVIDEIPYQVNKATMIERIAEAVRDKK
IEGISHVQDESDRSGVRVVVELKRDATAEVVLNQLFRFTPMQTSFACNMLALNGGRPEQL
TLRGFLTAFVDFREDVVARRTAYLLRKARERSHILCGLAVAVSNVDEVVATIRASQDASE
AREKLMTRRWPAHDIAAYIQLIDDPTHKMNEDGTYNLSESQARAILELRLQRLTQLGVKE
VTDELEELAKKIKEYLEILGSRERIMEIITNEMVAVKEQFAVPRRTEIADWAGDMDDEDL
IEREDMVVTVTAGGYIKRTPLAEFRAQKRGGKGVSGGSLKEDDVVTQLFVANTHTQLLFF
TTAGMVYKLKCWRLPQGGRTSKGKAIVNILPIPQGVSVAAIMPVDRDEEDWDDLQIVFAT
SKGSVRRNRLSDFTNVMRNGKIAMKFEGEDEATRLINARICSEDDDVMLVTDSGRAIRFP
VPDVRVFNSRNSTGVRGVKLNNGDEVVSMSVIRHFEAESDERASYLKMRRLMAGVTEDEG
ADEEDGNADSLLPSERYAEMSAAENLILTITAKGLGKLSSSHDYPIRGRGGMGVTAWEKS
MRGGPIVASFPVEMDDQIMLATSTGQSIRVPVEGISFRSRSAGGVKVFNTRAGETVVSVA
WIADQGDEEDEAES
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacgccggaaccccctgataacgatgacgaaatgagcggaccggagcgcccc
gcgccgagcgggccggcgatttcgatcatcgacgagatgaagtcgagctatctcgactac
gccatgagcgtgatcgtcagccgcgcgatcccggatctgcgcgacgggctaaaacccgtg
cacagacgcatcctttatacgctctgggagaacgggcagaccaagtccaagggctatcgc
aaatgcgccaccgccgtgggcgacgtgatgggccgctatcacccgcatggcgactcggcg
gtctatgacgcgctggtgcgcatggcgcaggatttctccatgtcgctgccgctgatcgac
ggtcagggcaatttcggctccatggatggcgacccgcccgccgcctaccggtatacggaa
tcgcggctggagcgctccgccgaggcgctgctggaggatatcgacaaggagaccgtcgat
ttcgttcccaactacgccaacgagcgcaacgagcccgtggtgctgccggcgcgttatccc
aatgtgctggtcaacggtgccgagggcatcgccgtcggcatggccacgcgcatcccgccg
cacaatctgggcgaggtgatcgacgccacgctggcgctgatcgagaaccccgatctcagc
tcggagcagcttatcgagtacatccccgccccggatttccccacgggcggcgtgatcctc
gggcgctccggcgcgcgcaaggcctatctcgaaggccgcggctcggtgatcatccgcgcc
aagacccgcgtcgaggagatcaagcgcgaccgctatgccatcgtcatcgacgagatcccc
tatcaggtgaacaaggcgacgatgatcgagcgtatcgccgaggccgtgcgcgacaagaag
atcgagggcatttcccatgtgcaggacgaatccgaccgctccggcgtgcgagtcgtcgtc
gagctcaagcgcgacgccaccgccgaggtggtgctgaaccagctcttccgcttcacgccg
atgcagacaagctttgcctgcaacatgctggcgctgaacggcgggcggcccgagcagctc
acgcttcgcggcttcctcaccgccttcgtggatttccgcgaggacgtggtggcgcgccgc
accgcctatctgctgcgcaaggcgcgtgagcggagccatatcctctgcggtctcgccgtg
gcggtcagcaatgtcgacgaggtggtcgccacgatccgcgcctctcaggatgcgtcggaa
gcgcgcgaaaagctgatgacccggcgctggccggcgcatgacatcgccgcctatatccag
ctcatcgacgatccgacccacaagatgaacgaggacggcacctataacctgagcgaaagc
caggcccgcgccatcctcgagctgcgcctgcaacggctgacccagctcggcgtcaaggaa
gtgacggacgagctcgaagagttggcgaagaagatcaaggaatatctcgagatcctcggg
agccgcgagcgcatcatggagatcatcaccaacgagatggtcgccgtgaaggagcagttc
gccgtgccccgccgcaccgagatcgccgactgggccggcgacatggacgacgaggacctg
atcgagcgcgaggacatggtcgtcacggtcaccgccggcggctatatcaagcgcacgccg
ctggccgagttccgcgcccagaagcgcggcggcaagggtgtctcgggcggctcgctgaag
gaagacgacgtcgtcacgcagctctttgtggccaatacccacacgcagcttctgttcttc
accaccgccggcatggtctacaagctcaagtgctggcgcctgccgcagggcggccgtacc
tccaagggcaaggccatcgtcaatatcctgccgatcccgcagggcgtctcggtggcggcg
atcatgccggtcgaccgcgacgaggaggattgggacgatctgcaaatcgtcttcgccacc
tccaagggctcggtgcgccgcaaccggctgtcggatttcaccaatgtcatgcgcaacggc
aagatcgcgatgaaattcgagggcgaggacgaggccacccgcctgatcaacgcccgcatc
tgctccgaagacgacgacgtcatgctggtcaccgattccggtcgcgcgatccgcttcccg
gtgcccgatgtgcgggtgttcaactcacgcaactccaccggcgtgcgcggcgtcaagctg
aacaatggcgacgaggtcgtgtcgatgtcggtgatccgccacttcgaagccgagtccgac
gaacgcgcctcctatctcaagatgcgccggctgatggccggggtgaccgaggacgagggc
gccgacgaggaagacggcaatgccgacagcctgctgccgtccgagcgctatgccgagatg
tcggcggcggaaaacctgatcctgacgatcaccgccaagggtctgggcaagctgtcctcg
tcgcatgactacccgatccggggccgtggcggcatgggcgtgaccgcctgggaaaaatcc
atgcgcggcgggccgatcgtggcctccttcccggtcgagatggacgaccagatcatgctc
gccacctccaccggccagtcgatccgcgtgccggtcgagggcatctccttccgctcgcgc
agcgccggcggcgtgaaggtgttcaacacccgtgccggcgagacggtggtttccgtcgcc
tggatcgccgatcagggcgacgaagaggacgaggcggagagctga
DBGET
integrated database retrieval system
