Candidatus Paracaedibacter acanthamoebae: ID47_08945
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Entry
ID47_08945 CDS
T03232
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
paca
Candidatus Paracaedibacter acanthamoebae
Pathway
paca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ID47_08945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paca03400
]
ID47_08945
Enzymes [BR:
paca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ID47_08945
DNA repair and recombination proteins [BR:
paca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ID47_08945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF3670
Motif
Other DBs
NCBI-ProteinID:
AIK96830
UniProt:
A0A077B1M1
LinkDB
All DBs
Position
1849992..1850810
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AA seq
272 aa
AA seq
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MEKRSKNPVTGNISDVLEWYTDIGMTVAIGNAPVNHKQVRPSIHAVTNPMLPAKTGTDPL
PKVVASSKQVVNSKAIAAACKTVDELRQAIINFDGCDLKMTATHTVFSDGNPEAKIMIIG
EAPGADEDRQGRPFVGLSGQLLDRVLASIHLSRTQNIYISNIISWRPPGNRTPTPHEIAL
CQPFIERHIELIAPKILILVGGVSAKTLLNTNEGIMKLRGKWHEFKTDTMQNPIKTMATY
HPAFLLRSPGQKAAVWKDLLLVQEEMQKIGLA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcgaagcaagaacccggtcactgggaacattagtgatgttttagaatggtat
actgatattgggatgaccgttgccattggtaacgcgccggtcaaccataaacaagtacgc
ccctctatccatgcggtaacaaatccgatgctgccagcaaaaacggggactgaccctttg
cctaaagtagtggcatcctctaaacaggttgtgaattcaaaagccattgctgctgcttgc
aaaacagttgatgaactccgtcaggctataataaattttgatggctgtgacctaaaaatg
acagctacccacactgttttttctgatggcaatccagaagccaaaattatgatcattggt
gaagccccgggcgcagatgaggatcggcaaggacgtccttttgtcggattatctggccaa
ttgttggatagagtcctggcaagcatacacctcagccgcacacaaaatatttacattagc
aatattatttcttggcgcccgccaggcaatcgcacccccaccccccatgaaattgcccta
tgccaaccgtttattgagcggcatattgaattgatcgcccccaaaattttaattcttgtc
ggtggtgtttcagcaaaaacgctccttaatacgaacgaaggaattatgaaattacgcggc
aaatggcatgagtttaagactgacaccatgcagaaccctattaaaaccatggcaacctac
catcccgcttttttgctgcgctcacctggacaaaaagccgctgtttggaaagatttgttg
ttagtccaagaggaaatgcaaaaaattgggcttgcgtaa
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