KEGG   Candidatus Paracaedibacter acanthamoebae: ID47_11460
Entry
ID47_11460        CDS       T03232                                 
Name
(GenBank) hypothetical protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
paca  Candidatus Paracaedibacter acanthamoebae
Pathway
paca03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:paca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ID47_11460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paca03400]
    ID47_11460
Enzymes [BR:paca01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     ID47_11460
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ID47_11460
DNA repair and recombination proteins [BR:paca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ID47_11460
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N IBR
Other DBs
NCBI-ProteinID: AIK97215
UniProt: A0A077B2I7
LinkDB
Position
complement(2342954..2343790)
AA seq 278 aa
MPELPEVETVCRGLEQMLQGYQIDAVELRRLDLRYPFPPLMNERLEGTKVIEVERRAKYI
LMHTDLGHTWLIHLGMSGRIHELAGTDTPGKHDHAIIHLQDGRRIAYNDPRRFGYMDLLP
RAFIHQSIHLKNLGLEPLAPDLTAEIFHTLLSKAKRPIKTTLLDQRLVVGLGNIYVCEAL
WQSKIHPEEQASTLTKRQAEILLESARDILQKAIKAGGSTLKDYRQVNGELGYFQHTFSV
YDRETGACQRPSCSGTIKRMNQSGRSTFYCPSCQRRQS
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcctgaactccccgaagttgaaaccgtttgtcgtggtttagaacaaatgctgcaagga
tatcaaattgacgcagtcgaactgcgccgtttggatctacgctatcccttcccgcctctg
atgaatgagcgtttagagggaacaaaagtcatcgaggttgaacgccgtgcaaagtatatt
ttaatgcacaccgatttagggcatacctggttgattcatttaggtatgtctggccgtatc
catgagcttgctggaacagatacgcccggcaaacatgaccatgcgattattcatctgcag
gatggccggcgaattgcttacaatgatccgcggcgctttggctatatggatttgctgcct
cgagcctttatccatcaatccattcatctcaaaaatttaggcttagagccgttagctccc
gatttaacggcagaaatatttcatactctcctttctaaagcaaagcgtcccattaaaacc
accctgctcgatcaacgattggtcgtcggtcttggtaatatttatgtttgtgaagcgtta
tggcagtcaaaaattcaccccgaagaacaagcctccaccttaacaaaaaggcaagcggaa
attttgttagaatcagcccgagatatcttgcaaaaggctattaaagcgggtgggtcaacc
ttaaaagattatcggcaagtgaatggggagcttggatattttcagcacaccttttctgta
tatgatcgtgagacaggggcttgccaaaggccttcttgtagcggcacaataaaacgaatg
aatcaaagtgggcgatccacattttattgtcctagttgtcagaggaggcaatcatga

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