Syntrophotalea acetylenica: A6070_03430
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Entry
A6070_03430 CDS
T04585
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pace
Syntrophotalea acetylenica
Pathway
pace03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pace00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6070_03430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pace03019
]
A6070_03430
03400 DNA repair and recombination proteins [BR:
pace03400
]
A6070_03430
Enzymes [BR:
pace01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6070_03430
Messenger RNA biogenesis [BR:
pace03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6070_03430
DNA repair and recombination proteins [BR:
pace03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6070_03430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
APG43294
UniProt:
A0A1L3GH13
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All DBs
Position
739165..740955
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AA seq
596 aa
AA seq
DB search
MYPDPLDILRRVFGFQSFRPLQEEIIRRLVAGRDAFVLMPTGGGKSLCYQLPALMRKGVA
IVVSPLISLMKDQVDALRVNGVRAAYYNSSLASAEARRVLADLHGGRLELLYIAPERLMG
SGFLERLADIDVALFAVDEAHCISQWGHDFRPEYIQLGQLRRHFPEVPLVALTATADAQT
RQDILAGLGLSREDSFITSFDRPNIRYTVLEKHQPARQLATFLAAHGGEAGIVYALSRKR
VEEVATRLCDAGISAAPYHAGLADGERNRVQELFLRDELQVVVATVAFGMGIDKSNVRFV
VHYDMPKNIEGYYQETGRAGRDGLPAEALLLFGYGDVALCRGLIEKGGNEEQNRIELHKL
NAMAAFAEALTCRRRVLLGYFGEQTTEDCGNCDICLQPPESYDATEDARKALSCVYRVGQ
RFGAGHVIDVLRGADSDRIKRLGHDRLSTYGIGADVSRDVWGSLLRQLVHHGYLYQDVGN
YSILRLTEKARPLLRGETSLRLARPRIRVRAVRSAAPRNAAGWSYDEGLFEALRTLRKRL
ADREQVPPFVVFSDATLAEMAARRPRDAAGLLSVNGVGQRKLERYGEDFLALLIDY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccgatccgctggatattttgaggcgcgttttcggttttcagtcctttcgcccc
ctgcaggaagagatcatccgccggctcgttgccggtcgggatgcctttgtgctgatgccg
accggcggagggaagtctctctgctaccagctgccggcgttgatgcgcaagggggtcgcc
attgtcgtgtcgccgctgatatccctgatgaaagatcaggtcgatgcgttgcgcgttaat
ggtgtccgcgccgcctactacaactcctcccttgcctccgcggaggcccgccgggtgctg
gccgatctgcacggggggcgcctcgaactgttgtatatcgccccggagcgcctgatgggg
tccggttttctggagagactggcggatatcgatgtcgcgctgttcgccgtcgacgaggcg
cattgcatttcccagtgggggcacgatttcaggccggagtatattcaactgggccagctg
cgccggcattttcccgaggttcctctcgtcgccctgaccgcgactgccgatgcacagacc
cgccaggatatcctggcgggtctcgggctgtcccgtgaggatagcttcatcaccagcttc
gatcgtcccaacattcgatatacggtgctggaaaagcaccagccggcccggcaactggcg
acctttcttgccgcgcacggcggtgaggccggaattgtctacgcgctgagccgcaagcgg
gtggaggaagtggccacccgtttatgcgatgcggggatctcggcagcgccatatcatgcc
ggcctggcggatggcgaaagaaaccgtgtgcaggagctgttcctgcgggacgaactgcag
gttgtggtggcaacggtggcgtttggcatgggtatcgacaaatcgaatgttcgcttcgtg
gtgcattacgacatgcccaagaatatcgaaggctattatcaggaaaccgggcgcgccggg
cgcgatggcctgccggcggaggctctgctgttgtttggttacggggatgtggcattgtgc
cggggcctgatcgaaaaaggcggcaacgaggaacagaaccgcatcgaactgcacaagctc
aacgccatggcggcgttcgccgaagcgcttacctgccggcgccgcgtgctgctggggtat
ttcggggagcagacgacggaagattgcggcaactgtgatatttgtcttcagcccccggaa
tcctacgacgccaccgaggacgcgcgcaaagccctgtcctgtgtgtaccgcgtcgggcag
cgttttggtgccgggcatgttatcgacgtgctgcgcggtgccgacagcgatcgtatcaag
cgacttgggcacgaccggctgtcgacctacggcatcggcgccgatgtcagccgggacgtt
tggggcagcctgctgcggcagttggtgcatcacggttacctgtatcaggacgtaggcaat
tactccatattgcgtttgactgaaaaagcacggccgttgctgcgcggagagacctcgctg
cggttggccaggccgcgaatcagggtgcgtgcggtccgcagtgccgcaccgcgcaatgcc
gcgggctggtcctacgatgaaggcttgtttgaagccttgcgcacattgcgcaagcggctg
gccgatcgtgagcaggtgccccctttcgtcgtgttttcggatgccacgcttgcggaaatg
gccgccagacggccgcgggatgcggcagggttgctgagcgtcaacggtgtcggtcaacgc
aagctggagcgctatggcgaggattttctggcgttgctcatcgattattga
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