Cutibacterium acnes HL096PA1: PAGK_0993
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Entry
PAGK_0993 CDS
T02638
Name
(GenBank) Holliday junction DNA helicase B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pach
Cutibacterium acnes HL096PA1
Pathway
pach03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAGK_0993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pach03400
]
PAGK_0993
Enzymes [BR:
pach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAGK_0993
DNA repair and recombination proteins [BR:
pach03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAGK_0993
RecFOR pathway proteins
PAGK_0993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
nSTAND3
Mg_chelatase
TIP49
AAA_14
AAA_3
RNA_helicase
Zeta_toxin
Sigma54_activ_2
IstB_IS21
TsaE
NACHT
NB-ARC
AAA_25
NTPase_1
AAA_18
ABC_tran
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AGJ79836
LinkDB
All DBs
Position
complement(1114925..1115953)
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AA seq
342 aa
AA seq
DB search
MSVEHSPVDPSAEPPEKAEEAALRPGALAEFGGQQRVADQLGLVLAASKSRGTTPDHVLL
SGPPGLGKTTLAMIIASEMSAPIRISSGPAIQHAGDLAAILSSLVPGEVFFLDEIHRMSK
PAEEMLYLAMEDFRVDVVVGKGPGATAIPIEIPPFTLVGATTRAGLLPGPLRDRFGFTAQ
LDYYEVADLERIVTRSAGVIGVELAEGAANTIASRSRGTPRIANRLLRRVRDWADVHHES
PVTPQGAETALDLYEVDPLGLDRLDRAVLHAVCLKFGGGPVGLSTLAISVGEEPQTVEEV
AEPFLVRLGFLMRTPRGRVATDRAWRHLGLEPPPDSSGEGLF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggaacactcgcccgtcgatccgtcggccgaaccccctgaaaaggctgaagaa
gcagctctacgtcctggcgcgctggcagagttcggaggacaacagcgagtcgccgatcaa
ctaggtctggtccttgccgcgtcgaagtcccgtggtacgacccccgaccatgttctgctg
tcggggccgccaggtcttgggaagacgaccttggccatgattattgcctccgaaatgtcg
gcaccaatccgtatttcctcgggtcctgccattcagcacgccggggatctggctgcgatc
ttgtcctcgttagtacccggcgaagtgttctttcttgacgagatccaccggatgtccaag
cctgccgaagaaatgctttacctggctatggaggatttccgggtcgacgttgttgtgggt
aaagggccgggagctaccgcgattccgattgagatcccaccgttcaccctggtgggggca
acaacgcgagctgggctgcttccggggccgttgcgtgaccgcttcggctttactgcccag
cttgactactacgaggtagctgatctcgaacggatcgtgacgcgatcggccggggtcatc
ggagttgagcttgctgaaggtgcggcaaacacgattgcgtcgcggtctcgcggtacgccc
cgtatcgcgaaccgcttgctgcgacgggtccgtgactgggcagacgttcatcatgagtct
cctgtgacgccgcaaggagccgagaccgcccttgacctctacgaggttgatccgttgggt
ctggaccgcctcgacagggcggttctccatgcggtgtgtctaaagttcgggggcgggccg
gtaggcttgtcaacccttgctattagcgtgggggaggagccacagacggttgaggaagtt
gctgaacctttcctggtacgacttggttttctcatgcgcaccccgaggggccgcgtcgct
actgatcgagcttggcgacatctcggccttgaaccacctcccgacagttccggtgagggg
ctgttctga
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