Cutibacterium acnes hdn-1: TIA1EST1_08055
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Entry
TIA1EST1_08055 CDS
T03470
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pacn
Cutibacterium acnes hdn-1
Brite
KEGG Orthology (KO) [BR:
pacn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacn03019
]
TIA1EST1_08055
03009 Ribosome biogenesis [BR:
pacn03009
]
TIA1EST1_08055
Messenger RNA biogenesis [BR:
pacn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TIA1EST1_08055
Ribosome biogenesis [BR:
pacn03009
]
Eukaryotic type
Pre-60S particles
RNases
TIA1EST1_08055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AID36261
LinkDB
All DBs
Position
1741538..1742146
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AA seq
202 aa
AA seq
DB search
MLVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMH
TTSGLLAELDKGLTMAQAQDQVLDYIRTYVPQAGKAPLAGNTIGTDRSFLAKDMPKLESY
VHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWREVLMVPSPGP
ETTRCDEIAAKYQGFLTGAGRD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgtggatcgattgcgagatgaccgggctcgacctggcccacgacgggctcatc
gaggtggccgcactggtcaccgatggacagctcaacgttcaaggtgagggggtggacgtc
atcatcaagcccgagccccagtggctcgatcacatgaatgatttcgtgcgcaacatgcac
accacatccggccttcttgcggagctcgacaagggactgacgatggcgcaggcccaggat
caggtgctcgactacatccgtacctacgtcccacaggctggtaaggcgccgttagctggc
aacaccataggcaccgaccgctccttcctggccaaggacatgcctaaactcgagtcctac
gtgcactaccgcaacgtcgacgtctcctccatcaaggaactggcacgacgctggtacccg
cgcgcattcggacactccccggagaagcagggcaaccaccgagcgctcgctgacatccag
gagtccattgaggagctcatgtactggcgcgaggtccttatggttccttcccctgggccg
gaaaccacgcgttgtgatgagatcgcggccaagtatcagggcttcctcaccggggctggg
agagactga
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