Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_02275
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Entry
TIIST44_02275 CDS
T01972
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Pathway
pad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TIIST44_02275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pad03400
]
TIIST44_02275
Enzymes [BR:
pad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TIIST44_02275
DNA repair and recombination proteins [BR:
pad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TIIST44_02275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AER04974
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All DBs
Position
490936..491829
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AA seq
297 aa
AA seq
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MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL
AGRNGVALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTNGLPTELLPFADEGRYIE
VDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFRDHLVRCRQECTAQGRHF
LVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS
WWSWRGKAFVNDAGWRIDYHLASPELASKAITSEIDRDPSYSERTSDHAAVVIDYDL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccagcttcaacatcaacggtatccgagctgccttaaagcggggattctcc
gagtggatggaggctcgtgactgcgacgtcatcgggctgcaggaagtgcgttgccgtcct
gccgacctacccgaaggagccttcggtgaccgtcacgtctcctgggcacccggctcgctg
gccggacgcaacggcgtcgctctcctcacccgtaccgccccggccgaggtccggtcctgg
ggaacccacctcgtcatgactcccggccaggctcctacccccgcacaggtgctcacaggc
aacaccaacggcctccccaccgagttgctgcccttcgccgacgagggacgctacatcgag
gtcgacctggccgatactcccctcaccgtcgcctgcctctacctgcccaaaggcgccacc
ccggatccagccaacgagaaagccatcgccaagcaggaccgcaaaatggccttcctggca
gggttccgcgaccacctagtccgatgccgccaagaatgcaccgcccaaggccgccacttc
ctcgttatgggtgacttcaacatcgcccacgaaaacgccgacctcaagaactggaaagcc
aaccagcacaatgagggattcctacccgaagagaggcagtggttcgacaccatcctctcc
cccgacaccctcattgacgttgtgcgcgcccagcaccccgacaccaacgggccctactcg
tggtggagctggcgcggcaaggccttcgtcaatgacgcgggctggcgtatcgactaccac
ctggcctcaccagagttggcgagcaaagccatcacgtccgagattgatcgtgacccttcc
tactccgagcgcacctccgaccacgcagcagtagtcatcgactacgacctgtaa
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