Pygoscelis adeliae (Adelie penguin): 103925865
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Entry
103925865 CDS
T06012
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103925865 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
padl03000
]
103925865 (ARID1A)
03021 Transcription machinery [BR:
padl03021
]
103925865 (ARID1A)
03036 Chromosome and associated proteins [BR:
padl03036
]
103925865 (ARID1A)
Transcription factors [BR:
padl03000
]
Eukaryotic type
Helix-turn-helix
ARID
103925865 (ARID1A)
Transcription machinery [BR:
padl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103925865 (ARID1A)
Chromosome and associated proteins [BR:
padl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103925865 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103925865
NCBI-ProteinID:
XP_009332935
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMG
SISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPYSQQPPSQTPHSQPSYQQQ
QQPQSQPPQLQTSQPAYSQQQSQQPHQQSPTPYPQQQSTAQQHQQSQPPYSQQQSQSPYQ
QQQQTQQTASSALSQQSSSYPQSQPQQQQSAYSQQRFPPPQELSQDSFGSQASSAPSMAS
SKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPF
SPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDGIMHPSM
NQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGG
QYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQMHGQTGVPPYSGLPPGRMSHA
TMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQ
GGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGEVKLTPATK
MNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTN
LPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCL
YAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDL
KPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMM
GRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSY
GGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYSPSRYPQQQQQQQRHDSYGNQF
STQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSAGQGQTQQQ
LPPAQTQQPSQQQTAQPSPQQDLYNQYGSTYPAADRRSAGGPQNQFPFQFGRDRVSAPPG
SNAQQNMPPQMMGGPIQSTPEGPQQGAMWQGRNEIGYSYPNRQSTGSAPQGPAYHGVTRT
DEILHSDQRVNHEGPWPSHGNRQPPPGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPA
PLPRPLENRTSPSKPPFLHSGVKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEAT
QPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQL
PGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEEDEPRS
LNCEEEEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGR
VQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCNSVLRKRSAAESNPSTREG
ETPPTDSSSEKRITATMDDMLSARPGSLAGEEEEVKALETAKESGKFPFGISPAQSHRNI
KILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILG
KLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLD
LSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNV
DLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSI
GNLLGFLEDSLAATQFQQSQASLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFT
LYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgaggcctcagccatatggaggaaacaacccgtacacacaa
caacagggacctcaggcggggccacagcaaggacatggctatccaggacagccgtatggg
ccacaaactccccagagatatcccatgggaatgcaaagcaggacgcaaagtacaatgggc
agcatctcatatgcacagcagattcctccttacggacagcaaggccccagtgcatatggg
cagcaaagccagactccttattacaaccagcaaagccctcatccccagcagcagcagcct
ccatattctcagcagcctccatcccagacccctcactctcagccttcttatcagcagcag
caacagcctcagtctcaacctccacaacttcagacatcgcagcctgcgtattctcagcag
cagtcccagcagccccatcagcagtccccaactccatatcctcaacagcagtccacagcc
cagcaacatcaacagagtcagcctccctactcacagcagcagtcacagtcgccctaccag
cagcagcaacaaactcagcagacagcttcctcggctctttctcagcagtcatcttcatac
cctcagtcacagccgcagcagcagcagtctgcgtactcccagcaacgcttcccccctcct
caggagttatctcaagactcatttgggtcccaggcatcatctgctccctcaatggcttcc
agtaaagggcaagaagatatgaacttgaatcttcagtccagaccttctagcctaccggac
ctgtctggttcaatagatgatctacccatgggtacagaaggagccctgagtcctggagta
agcacatcagggatttccagcagtcaaggagagcagagtaacccagctcagtctcctttc
tctccacatacctctcctcacctgccaggcatcagaggaccctccccatccccagttgga
tctccagctagtgttgctcagtcccgctctggtccactttcacctgctgcagtaccaggc
aatcagatgccaccccgaccgcccagtggccagtcggacggtatcatgcatccttccatg
aaccagtcaagcatagcgcaagatcgaggttacatgcagaggaatcctcagatgccccag
tacagctcaccccagcccggctcagccttatctccccgtcagtcttctggaggacagatg
cacgctggaatggggccataccagcagaactccatgggaagctacggaccccagggcggg
cagtacggacctcaaggaggttatcccaggcagccaaattacaacgctatgtccaatgcc
aactaccccagtccaggaatgggaggaagcatgaaccccatgggagcagggagccagatg
catgggcagactggtgtgccaccatacagtgggcttcctccagggaggatgagccatgca
accatggggaacagaccttatggacctaacatggcgaatatgccgcctcaggtggggaca
gggatgtgccccccaccaggtggcatgaatcgcaaagcacaagaagcggctgctgccgcc
atgcatgctgctgccaactccatccagaacaggcctcctggttatcccaacatgaatcaa
gggggaatgatgggcactggacctccttacggacagggaatcaacagtatggctggcatg
ataaacccccagggcccaccctatccgatgggtgggaatatggctaacaactctgcaggg
atggcggcaagccctgaaatgatgggtcttggggaagtcaaattaacacctgcaactaaa
atgaacaataaggcagatgggacgccaaaagcagaatccaagtcaaagaagtccagttcc
tctacaacaaccaacgagaagatcaccaagctctatgagctgggtggtgagcctgagagg
aagatctgggtagatcgttacctggcctttaccgaagagaaggccatgggcatgacaaat
ctcccagcagtaggcaggaaacccttggacctttaccggctctacatctcagtgaaggag
attggaggattgactcaggtcaacaaaaacaagaaatggcgcgagttagccacaaatctc
aatgtgggcacgtccagcagtgcagctagttctttgaagaagcagtacatccagtgtctc
tatgcctttgagtgcaagattgagcgaggtgaagacccccctccagatatctttgcagct
gccgattcaaagaagtctcagactaagatacagcctccatctccagcgggttcaggctca
atgcagggtcctcagacgcctcagtccaccagcagctccatggcagaaggaggagacttg
aagccaccaactccagcgtctacaccacacagtcagatgccccctttgccaggcatcagg
agtaactcagtgggccttcaggatgcctttgcagatggtagtgatcccacgttccagaag
cggaactccatgactccaaatccagggtaccagcccagcatgaatacctccgacatgatg
ggtcgcatgtcttacgagccaaataaagatccttacagcagtatgaggaaagctccagga
agcgatcccttcatgtcctcagggcagggccccaacagtggtatgggtgacccttacaat
cgtgctgcaggtccagggatgggtaatatggccatgggacagcggcaacactattcctac
ggaggtccttacgacagagtgaggacggagcccggcatgggacctgagggcaacttagca
accggaactccgcagccaaacatcatgccttccacccctgaatcggggatgtactctccc
agccgctacccgcagcagcagcagcagcagcaaagacatgattcctatggcaatcaattc
tccactcaaggcacatcctcgggcagccccttccctagccagcaaactaccatgtatcaa
cagcaacagcagaattacaagcgaccgatggatggcagctacggcccgcctgctaagcga
cacgaaggggagatgtacaacgtaccatacagcgccgggcaggggcagacgcagcagcag
ctgcctccagcacagacccagcaaccgagccagcagcaaactgcacagccgtctccacag
caggacttgtataaccagtatgggagtacataccctgctgctgaccgccgatctgccgga
gggccacagaaccagttcccattccaatttggcagagacagggtctcggctcccccaggc
tccaatgctcagcaaaacatgcctcctcagatgatgggtggtcccatacagtctactcca
gagggcccgcagcaaggcgccatgtggcaagggcgcaacgaaatagggtacagctatccg
aatcggcagagcactggctctgcgccccaggggcccgcttatcacggagtgactcgaaca
gatgaaattctgcattcagaccagagggtcaaccatgagggaccatggccttcccacggg
aaccggcagcctcctcctggtccctctgcccccgtgcccccaatgactaggcccccccag
tctaactaccagaccccccctagcatgcagaatcacattcctcaggtatccagcccagca
cctctgcccagacctctggagaatcgcacttctcctagtaaacctccattcctgcactcg
ggggtgaaaatgcagaaggcaggaccgccagtccctgcctcgcatataacaccagcagct
gtacagcctcccatgatccgacgagacatcaccttccctccgggatcagtagaagctacg
caacctgtgttgaagcagaggagacggctgacagcaaaagatattggaactcctgaagcc
tggagagtgatgatgtctctgaagtctgggctgctagctgaaagtacgtgggccttagat
accataaacatcctgctctatgatgacaacagcataatgaccttcaacctcagccagctg
ccaggcttgctggaactcttggtggagtatttccggcgctgcctgatcgagatctttgga
atcctgaaggaatacgaggtgggagacccagggcaaagaacactattagatcccgaaagg
ttctgcaaatcttcagcttcctctcatgaagaaggggaggaggaggatgaaccacggagc
ctgaactgtgaggaggaagaagaggatgaggaagaggaggaggctgcattttcgagcaag
gacaaagcacctctagagagcagcgaggaaaaactagttagtaaatttgacaagcttcca
gtcaaggtcgtgcagaaaaacgacccgtttgtggtagattattcagacaagctggggcga
gtgcaggagttcgaaagcggactgctgcactggcggattggcggcggagataccaccgag
cacattcagacccactttgagagcaagacggagctacctttgactcataaacgagcttcc
tgcaactctgtcttgaggaaacgttcagcagctgagagcaatccgagcactagggaagga
gagactcctccaaccgacagctcctcggagaagaggataactgccaccatggacgacatg
ctttcggcacgtccgggctccctggcaggggaggaggaagaggtcaaagctttggaaacg
gcaaaggaaagcggcaagtttccctttggcattagtccagctcagagccacagaaatata
aaaattctggaggacgaacctcacagtaaagacgagacgcccctctgcaccctcctggac
tggcaggactctctggcgaagcgctgcatctgtgtctctaacatcatcaggagtttatcg
tttgtgccgggcaatgacttcgaaatgtctaaacatcccgggctgctgctgattctaggg
aaactgattctcttacaccacaagcatccagaacgcaaacaggcacccctgacctatgag
aaagaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgc
ttggagatgctgcgtgaaaatacactggtcacgttggccaacatttctggccagctggac
ctctccccttacccggaaagcatctgtttgcctatcctggatggactcctccactgggca
gtatgtccatcagcagaggcccaggatccctttccaacactgggacccaatgcggtcctc
tcccctcagagactggttttggaaacactcagcaaactcagcatccaggacaacaatgtg
gatttgattcttgcaactccccccttcagtcgcttggagaagctgtacagcaccatggtg
cggttccttagtgacagaaagaacccggtgtgtcgagagatggctgtggtactactggcc
aacttggcacagggggacagcctggcagcaagagcgattgctgtgcagaagggcagcatt
ggcaacttgctgggcttcttggaggacagcctggccgccacgcagttccagcagagccag
gccagcttgatgcacatgcagaacccaccctttgagtcgacgagcgtggacatgatgcgc
cgagctgcccgggcgctgctcgccctggccaaggtggacgagaaccactcggagttcacg
ttatacgagtcgcggctgttggacatctccgtgtcgcctttgatgaactctttggtttca
caagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
