Pseudomonas aeruginosa NCGM 1900: NCGM1900_0784
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Entry
NCGM1900_0784 CDS
T03789
Name
(GenBank) putative exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCGM1900_0784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeb03400
]
NCGM1900_0784
Enzymes [BR:
paeb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCGM1900_0784
DNA repair and recombination proteins [BR:
paeb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCGM1900_0784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAP19908
LinkDB
All DBs
Position
complement(823219..824019)
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AA seq
266 aa
AA seq
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MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ
GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDGLLVASLYLPNGNPQPGPK
FDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECF
ERLLRQGWVDALRQRFPDRRIYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGVDR
WVRGEEHASDHAPAWVSLRRPSEPRR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtggacaccctgaagatcgccaccttcaacgtcaacggcatccagacccggctggccgcg
ctgctggcctggctggagcgggaagcgccggacatcgtctgcctgcaggaactgaaaacg
cccgacgcgcgcttccccgccgcggcgctggagaaggccggatacggcgcgatctggcag
ggccagtcggcgtggaacggcgtcgccatcctcgcccgcgacagccagccgctggaggta
cgccgcggcctgccgggcaacgccagcgatccccacagccgctacctcgaagcggccgtc
gacggcctgctggtggccagcctgtacctgcccaatggcaatccccagccgggaccgaag
ttcgactacaagctggcctggttcgagcacctcatccgccacgccgccgagctgatggag
agcggccatccggtggtgctggccggcgacttcaacgtggtgcccagcgacttcgatatc
tacgacacccgctcctggaaaaaggacgccctgctccagccggagtcccgcgagtgcttc
gagcgcctcctgcggcagggctgggtggacgcgctacgccagcgtttccccgaccggcgc
atctataccttctgggactacttccgccagcactggcaacgcgacgccgggctgcgcatc
gaccacctgctgctcagcgccagcctggcggaccacctggaagacgccggggtggatcgc
tgggtgcgcggcgaggagcacgccagcgaccacgcgccggcctgggtaagcctgcggcgt
ccctcagagccccggcgctag
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