KEGG   Paenibacillus sp. FSL R7-0331: R70331_04855Help
Entry
R70331_04855      CDS       T03357                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
paee  Paenibacillus sp. FSL R7-0331
Pathway
paee03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:paee00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    R70331_04855
Enzymes [BR:paee01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     R70331_04855
DNA repair and recombination proteins [BR:paee03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     R70331_04855
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AIQ50922
UniProt: A0A089KRA0
LinkDB All DBs
Position
complement(1101051..1101998)
Genome map
AA seq 315 aa AA seqDB search
MEVKPVKPFEPVLAAQLPSGSQWIAQIKWDGVRMLSCYDGSSIELVNRRGNRRTLQYPEL
TVQGRYCRADSYILDGEVIALSGGKPSFHEVMRRDGLRSEAAVRAVKPQVPVLYMVFDIL
YCNGEWLLDRPLSVRQQLLQDVLLPHPHVQNVPSYTDPAQLFAAACKGGLEGIICKDIRS
TYAPGGKDARWQKRKNILDVTAVAGGVTFRDGMVNALLLGLYDDEGRLHYIGHAGAGRLT
ATDWRNLTAQAHNLEVPVMPFTGVPQRSKDAVWIRPSLVFKLHFLEWNASGTLRQPVIQA
QVDLPPDACRLEQRG
NT seq 948 nt NT seq  +upstreamnt  +downstreamnt
atggaagtaaagccggtgaagccgtttgagccggtgcttgccgcacagctgccttccggc
agccagtggatcgcccagataaaatgggacggtgtccgcatgctctcctgctatgacggc
agctctatagagcttgttaaccgccgtggcaaccggcgcaccctgcagtatcccgaattg
accgtacagggacgttactgccgcgcagacagctatattcttgacggtgaggttattgcc
ctaagcggggggaagccgtcctttcacgaggtgatgcggcgtgacggcttaagaagcgaa
gcagctgtccgggcagtcaagccgcaggttccggtgctgtatatggtatttgatattctg
tactgtaacggtgaatggctgctggaccggccgttgtccgtacgccagcagctgctgcag
gatgtactgcttcctcacccccatgtgcagaatgtgccgagctacacagatccggcgcag
ctgttcgccgctgcctgcaaaggcggtctggaaggcatcatctgcaaggatatacgcagc
acttatgcccccggcggcaaggatgcacgctggcagaaacgcaagaacattctcgacgtg
accgctgttgccggaggggttaccttccgggatggaatggttaatgccctgctgctcggt
ctttatgacgatgaaggcaggctgcactatatcgggcatgcgggtgcaggccggctgaca
gccacggactggcgtaatctgacagcacaggcccataatctggaggtgcccgtcatgcct
tttacaggtgttccgcagcgcagcaaggatgcggtatggatcaggcccagcctggtattc
aagctgcatttcctggaatggaacgcctccggcacgctgcgccagccggttattcaggca
caggttgatctgccgcctgatgcctgccggctggaacagcgcggttga

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