Paenibacillus sp. FSL R5-0345: R50345_21290
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Entry
R50345_21290 CDS
T03333
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef00550
Peptidoglycan biosynthesis
paef01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R50345_21290
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paef01002
]
R50345_21290
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paef01011
]
R50345_21290
Enzymes [BR:
paef01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
R50345_21290
Peptidases and inhibitors [BR:
paef01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
R50345_21290
Peptidoglycan biosynthesis and degradation proteins [BR:
paef01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
R50345_21290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AIQ36957
LinkDB
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Position
complement(4661011..4662207)
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AA seq
398 aa
AA seq
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MRKLRFAVLVLCIAVSVLGPMSGAYAEEKNKDSGSKAAAVDLAPGARSAILMDAGTGTVI
YEKNSHDKLPPASITKIMTMLLTVEALDEGRLQLTDKVRTSEYAASMGGSQIFLEPGEEM
TVDDMLKGIAMASGNDASVAMAEKIAGSESAFVDLMNKRAEELGLKDTHFANCNGLPAAN
HYSSAYDIAVISRELLKHDQIIKYTGSYQDYLRKDSTKPFWLVNTNKLVRFYTGADGLKT
GYTAEAKFCLSATAARDGLRAVAVVLGEPNTKTRNSEVSGMFDYLFSQYKVHTIHKEGDA
IGTLKIEKGVKSELPITAKETYSVLLKKGVAQEGIRHELVLPESVKAPVAEGQSVGKLVV
YQGTQVIKEYDLKAGEAVPKAGWWKLFKRTTGSMFGVD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaaattgcgttttgctgtgcttgtgctctgtattgctgtgtcggttctaggacct
atgtcaggcgcttatgcagaggaaaaaaacaaggactctggcagtaaagctgccgctgta
gacctcgcaccgggagcacgttctgcgattttgatggacgctggtaccggcactgttatt
tatgagaagaacagccatgataagctgcctcccgcaagtattacgaagattatgacgatg
ttactaacggtggaagcgctggatgaaggtagactgcaactgacggataaggtgcggaca
agtgaatatgcggcttcgatgggcggatcgcagatttttctggagccgggtgaagaaatg
acggtagacgatatgctcaaaggcatcgctatggcgtctggtaatgatgcttctgtcgct
atggcggaaaaaatagcgggttcagagagtgcttttgtagacttgatgaataaacgtgca
gaggagctgggtctaaaagatacccattttgccaactgtaacggtcttccagccgccaat
cactattcctctgcatacgatattgcggtcatcagtcgggaacttttgaagcatgatcaa
attatcaaatatacgggttcctatcaggattacttacgcaaggattcaaccaaaccgttc
tggttggtgaatacgaacaagctggtgcgtttctacactggtgctgatggactgaagaca
gggtatactgcagaggctaaattctgtctgtccgctacagcggcaagagatggcctgcgt
gcagtcgctgttgtgctaggcgagccgaacacaaagacacgcaatagtgaagtctcaggc
atgttcgattacctgttctcgcaatataaggtacacacgatccacaaagaaggggatgct
atcggcaccctcaagatcgaaaagggcgtaaaatcggagctgccgatcacagcgaaagag
acgtacagtgttcttttgaaaaaaggtgtggcccaagaaggcattcgccacgaattagta
ttgccggaaagcgtgaaggctccagtggctgaaggtcaatctgtaggcaagctggttgtc
taccaagggacccaagtgattaaggaatatgatttaaaagctggggaagctgtgccgaaa
gcaggctggtggaagctctttaagcgtacaacaggctcgatgttcggcgtagattaa
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