Paenibacillus sp. FSL R5-0345: R50345_30790
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Entry
R50345_30790 CDS
T03333
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
paef
Paenibacillus sp. FSL R5-0345
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paef03016
]
R50345_30790
03036 Chromosome and associated proteins [BR:
paef03036
]
R50345_30790
Transfer RNA biogenesis [BR:
paef03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
R50345_30790
Prokaryotic type
R50345_30790
Chromosome and associated proteins [BR:
paef03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
R50345_30790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_binding_2
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
Pyr_redox
HI0933_like
ThiF
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AIQ38615
LinkDB
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Position
complement(6780658..6782544)
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AA seq
628 aa
AA seq
DB search
MSYDGGSYDVIVIGAGHAGCEAALASARMGCSTLMITINLDMVAFMPCNPSIGGPAKGHV
VREIDALGGEMGRNIDKTFIQLRMLNTGKGPAVHALRAQADKFLYQHTMKETMEKTPNLT
LRQGMVERLIVEDGRCAGVVTKTGTEYHSKTVILTTGTYLRGKVIMGELTYESGPNNQQP
SVKLSENLRELGFELVRFKTGTPPRVHRDTIDFSKTEIQPGDEEPKFFSFETKSSDNEQL
PCWLTYTSEVTHQIINDNLHRAPMFTGIIEGTGPRYCPSIEDKVVRFSDKSKHQIFLEPE
GKNTSEYYVQGLSTSLPEDVQLAILRSIPGMEKVEMMRNGYAIEYDAMVPTQLWPSLETK
RLPGLFTAGQINGTSGYEEAAGQGVMAGINAARKVQEKEPVILDRSQGYIGVLIDDLVTK
GTNEPYRLLTSRAEYRLLLRHDNADLRLTPIGYDIGLITKERFDNFTDKKERVEREIVRL
QETKVKPVEVNHVLAQYESAPIVDGSNLLVLMRRPELVYSFVDKVSPSPELLDAEMKEQV
EIQIKYAGYIEKQLQHVERLQKMEKKKIPDDINYNEIHGLAMEARQKLTKIRPISIGQAS
RIAGVTPADISILLVYLEHYNRVTAAKG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgatggaggtagctatgacgtaatcgtcattggcgccggtcatgccggttgt
gaggcagctctagcgtcagcacggatgggctgcagcacgttgatgatcacaattaacctg
gatatggttgcattcatgccctgcaatccgtccataggcggacctgccaaaggacatgta
gtgcgtgagattgatgcgcttggcggagaaatgggtcgcaatatagataagacatttatt
caacttcgtatgctgaatacgggcaagggacctgctgtacatgctttacgtgcacaagcg
gataaattcctttaccaacatacaatgaaggaaacgatggaaaaaacgcctaatttgaca
cttcgtcaaggaatggttgaacgtttaatcgttgaggacggacgttgtgcaggtgtagtt
acgaagactggaaccgaataccatagtaagacagttattctgactacaggtacttacctg
cgtggtaaagtgatcatgggtgaactgacatatgagagtggacctaacaatcagcagcca
tcagtgaagctatccgagaatttgcgggagcttggttttgaattggtgcgttttaaaacc
ggtacaccaccacgtgtacatcgtgatacgatcgatttctcgaagacagaaattcaacct
ggcgacgaggagcctaaattcttttcgtttgaaacgaaatcatccgacaatgaacagctt
ccttgttggttaacttatacctctgaggttactcatcaaattattaatgacaacctacat
cgtgcaccgatgtttacgggtattattgaaggaacaggtccacgttattgcccatctatt
gaagataaagttgtaagatttagtgataaatctaagcatcagatctttttagagccagaa
ggaaaaaatacatcggaatactatgtacaaggtctgtccactagtcttcctgaggatgtt
cagctagccattctgcgttccatccctggtatggaaaaggtagaaatgatgcgtaacggt
tatgctattgaatatgatgcaatggttcctacacagctatggccatctctcgaaactaaa
cgtttaccaggtcttttcacagctggacaaatcaatggtacttccggttatgaggaagca
gcaggccaaggtgtgatggctggaataaatgcagcgcgcaaggtgcaagagaaagaaccc
gtaattttagatcgttcacagggatacattggtgtactcattgatgatcttgtgactaag
ggtactaatgaaccttaccgtttgcttacttcacgtgcagaatatcggttgttgcttcgc
catgacaatgcagatctaagacttacacctattggttacgatattggtttgatcacaaag
gaacgatttgataacttcacggataagaaagaacgggtggagcgtgaaattgttcgtctg
caagagacaaaggttaaacctgttgaggtaaatcatgtactagcacaatatgaatcggca
cctattgtagacggcagcaatttgcttgttctgatgcgtcgtccagagcttgtatatagc
ttcgtagataaagtctctccatcaccggagctgctggatgcagaaatgaaggaacaagta
gaaatccaaattaaatatgccggttatattgaaaaacagcttcaacatgtggagcgcctg
caaaagatggaaaagaagaaaattccagatgacattaattataatgagatccatggatta
gcgatggaagcacggcagaagctgactaagatccgtccgatctctatcgggcaggcttct
cggattgcgggagtcacacctgctgacatctccattcttctcgtatatctggagcattac
aaccgggtaaccgcggcgaaaggataa
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