Pseudomonas aeruginosa YL84: AI22_09840
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Entry
AI22_09840 CDS
T03035
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
paeg
Pseudomonas aeruginosa YL84
Pathway
paeg02020
Two-component system
paeg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AI22_09840
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AI22_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paeg03021
]
AI22_09840
Transcription machinery [BR:
paeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AI22_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AHH49169
LinkDB
All DBs
Position
complement(2142780..2144273)
Genome browser
AA seq
497 aa
AA seq
DB search
MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGDDFDNSD
PLADGAEQAASAPQESPLQESATPSVESLDDDQWSERIPSELPVDTAWEDIYQTSASSLP
SNDDDEWDFTARTSSGESLHSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEI
LAAIDPELDVELDEVEVVLRRIQQLEPAGIGARNLRECLLLQLRQLPSTTPWLNEALRLV
SDYLDLLGGRDYSQLMRRMKLKEDELRQVIELIQCLHPRPGSQIESSEAEYIVPDVIVRK
DNERWLVELNQEAMPRLRVNATYAGMVRRADSSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLDYGEEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIFELK
YFFSSHVSTAEGGECSSTAIRAIIKKLVAAENAKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctagtcctcaagatgggccagcagctgacgatgacgccgcagctgcaa
caggccatacgcctcctccagctatccaccctggacctccagcaggaaatccaggaagcg
ctggaatccaatcccatgctcgaacgccaggaagacggcgacgatttcgacaacagcgac
cctctcgccgatggcgccgaacaggcggccagcgcgccccaggagagccctctccaggaa
agcgccacgcccagcgtcgaaagcctcgacgacgaccagtggagcgaacgcatacccagc
gagttgccggtggataccgcctgggaagacatctaccagaccagcgccagcagcctgccc
agcaacgacgatgacgaatgggacttcaccgcgcgcaccagcagcggcgagagcctgcac
agccacctgctctggcaggtcaacctggcaccgatgtcggacaccgatcggatgatcgcg
gtgaccatcatcgatagcatcaacaacgatggctacctcgaagagtccctcgaagaaatc
ctcgccgccatcgatccggaactggacgtcgagctcgacgaagtggaagtcgtgctgcgc
cgcatccagcaactggaacccgccggcatcggcgcccgcaacctgcgcgagtgcctgctg
ctgcaactgcgccagttgccgtccaccacgccctggctgaacgaagcgctgcgcctggta
tccgactacctcgacctgctcggcggccgcgactacagccaattgatgcggcgcatgaag
ctcaaggaagacgaactgcgccaggtcatcgagctgatccagtgcctgcatccccggccc
ggttcgcagatcgaatcgagcgaagccgaatacatcgtccccgacgtcatcgtgcgcaag
gacaacgagcgctggctggtcgagctgaaccaggaggcgatgccacgcctgcgcgtcaac
gccacctacgccggcatggtccgccgcgccgacagcagcgccgacaataccttcatgcgc
aaccagttgcaggaagcccgctggttcatcaagagcctgcagagccgcaacgaaacgctg
atgaaggtcgccacccagatcgtcgagcaccagcgcggtttcctcgactacggcgaagaa
gccatgaagccgctggtcctgcacgacatcgccgaagcggtgggcatgcacgaatcgacc
atttcgcgggtcaccacgcagaaatacatgcatacgccgcgcggcattttcgagctgaaa
tatttcttttcaagtcacgtcagtaccgccgaaggcggggaatgctcgtccaccgcgatc
cgcgcgatcatcaagaaactggtggccgcggaaaatgcgaaaaagccattgagcgacagc
aagatcgctggtttactggaggcacagggcattcaagtggctcgccgcaccgtcgccaaa
taccgcgaatccctgggcatagccccttcgagcgagcgcaagcgactggtgtga
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integrated database retrieval system
