Paenibacillus sp. FSL H7-0357: H70357_21275
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Entry
H70357_21275 CDS
T03358
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
paeh
Paenibacillus sp. FSL H7-0357
Pathway
paeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H70357_21275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paeh03019
]
H70357_21275
03016 Transfer RNA biogenesis [BR:
paeh03016
]
H70357_21275
Enzymes [BR:
paeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H70357_21275
Messenger RNA biogenesis [BR:
paeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H70357_21275
Transfer RNA biogenesis [BR:
paeh03016
]
Prokaryotic type
tRNA degradation factors
H70357_21275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AIQ18948
UniProt:
A0A089I8P3
LinkDB
All DBs
Position
complement(4714509..4716611)
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AA seq
700 aa
AA seq
DB search
MEQRVEMQLGGRRLVLETGRLAKQANAAVMVRYGDTAVLCTVTASSEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNMVMSVDQD
CAPDIAAMIGTSAALSISDVPFNGPIGGVAVGRIDGQFIINPDVAQQAASDIYVVVAGTK
DAIMMVEAEANEVPEDVMLEAIMFGHDEVRKIVATIEQLVAVAGKEKMAVKLHAVNADVN
TEVRAYAESRLVDAVKIAEKHARQDAIDLVNNETVEYFVEKYIETPELLKDVKEVLHDIV
KDEVRRLITHDKVRPDGRKLDEIRPIECDTSLLPRTHGSGLFTRGQTQILSVCTLGALGD
VQILDGIDPAETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF
PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI
QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIDGIDRKILQDALQQAKEGRMFILGKMMEAI
SEPRPSLSKYAPKIIIININPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIGSSD
EEMIQKARGIIEGIVREVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK
VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVLTSESGAKA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacgtgtagaaatgcagcttggcggaagacgccttgtgctggaaacaggccgt
ctggccaaacaagcgaacgcagccgtaatggttcgttacggagatactgctgtattgtgt
acggttacagcgtcaagcgaacctaaagatctggattttttcccgcttacggttaactat
gaagaaagattatacgcagtgggtaaaatcccgggcggatttattaaacgcgaaggcaga
ccaagtgagaaggctattttgtccagccgtctgactgaccgtccgattcgtccgctgttt
ccggaaggattccgcaatgacgtgcaagtattgaatatggttatgagcgtggatcaggat
tgtgcgccggatattgctgctatgatcggtacttccgcagcactcagtatttccgatgtt
cctttcaatggtcctatcggcggtgtggctgtcggccgcattgacggtcaattcatcatt
aatcctgacgttgcacagcaggcggcaagtgacatctacgtggtggtagcgggaactaaa
gacgccatcatgatggtggaagcggaagccaatgaagtgccggaagatgtaatgctggaa
gccatcatgttcggtcatgatgaagtccgcaagatcgtagcaacaattgagcagctggta
gcagttgccggcaaagagaagatggctgtgaagctgcatgcggttaacgctgatgtcaac
acagaggttcgcgcttatgcggaaagccgtctcgtagatgccgtgaaaattgccgagaag
catgcccgtcaggatgccatcgacttggtcaacaatgaaacggtggagtatttcgtagag
aaatacatagagacacctgaacttcttaaagatgtgaaggaagtcctgcatgatatcgtg
aaggatgaagtcagacgtttgattacacatgataaggttcgcccggatggccgcaagctg
gatgaaatccgtccgattgaatgcgatacttctctgcttccgcgtacgcacggatccgga
ctattcacccgtggacaaacacaaatccttagcgtatgtacactgggtgcactgggtgat
gtacagattcttgacggtattgatccggcagaaaccaaacggtttatgcatcactacaat
ttccctccgttcagcgtaggggaggcacgtccgcttagagcaccgggacgtcgcgagatt
ggccacggagcccttggagaacgcgcgttgtccaaagtcattcctagtgaaactgaattc
ccgtacaccatccgtttggtatctgaagcgattgaatccaacggatctacttcccaggca
agtatctgcgcgagcattttggcaatgatggatgcgggtgtgccgatcaaagcccctgta
gcgggagtagcgatgggtctgattaaagatggagagcatgtctcgatcttaacggacatt
caaggaatggaagatcatcttggcgatatggacttcaaggtagcaggtacggctgaaggt
gtaacggcgatccagatggatatcaaaatcgacggcatcgaccgtaaaatcctgcaggat
gctttgcagcaggctaaagaaggacgtatgttcatcttgggcaaaatgatggaggctatc
tccgagcctagaccaagcttgtccaaatacgctcctaagatcattatcatcaatatcaat
ccggacaagatccgtgatgttatcggtgcaggtggtaagattatcaataaaatcattgaa
gaaaccggcgtgaagatcgacatcgaacaggatggccgtgtctttatcggatcttcggac
gaagaaatgattcagaaagcccgcggcattatcgaaggcattgtgcgtgaagtgcaggtc
ggcgaaatttatgtgggtaccgttagacgcatcgagaagttcggcgcatttgttgaactg
attccgggtaaagacggattggtgcatatttcccagctctccactgagcgcgtagccaag
gtggaagatgtagttgccatcggcgacaccatcactgtaaaagtaaccgaaattgaccag
cagggccgtgtgaatctatcgcgcaaagcggtattgacttcggaaagcggagcaaaggcg
taa
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