KEGG   Pseudomonas aeruginosa PAO1-VE2: N296_3388
Entry
N296_3388         CDS       T03170                                 
Name
(GenBank) DEAD/H associated family protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
paei  Pseudomonas aeruginosa PAO1-VE2
Brite
KEGG Orthology (KO) [BR:paei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paei03400]
    N296_3388
Enzymes [BR:paei01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     N296_3388
    5.6.2.6  RNA 3'-5' helicase
     N296_3388
DNA repair and recombination proteins [BR:paei03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    N296_3388
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH AAA_25 PhoH
Other DBs
NCBI-ProteinID: AGY63679
LinkDB
Position
complement(3663504..3667853)
AA seq 1449 aa
MMPISSSSARRAEPAPRPLAEFHPVVRQWFERHFAAPTPAQVEAWPAIREGLSTLVAAPT
GSGKTLTAFLAAIDALVVEGLAAGGELADATQVVYVSPLKALSNDIRINLEQPLAGIREE
LARLGLPDVDIRSAVRTGDTPQVERGAMRKRPPHILVTTPESLYILLGSESGRQMLAGVR
SVIVDEIHALAGSKRGSHLALSLERLQALCPRPLLRIGLSATQKPIEKVARFLVGASGNP
RDPACRIVDVGYTRPRDLGIEVPPVALEAVMSNDTWELVYDRLAHLAGEHRTTLVFVNTR
RMAERVTRFLAERLGSRQVAAHHGSLAKELRLDAEQRLKAGQLKVLVATASLELGIDIGD
VELVCQLSSPRSIAAFLQRVGRSGHSVGGTPKGRLFPTSRDDLVECAALLDSVRRGELDS
LVLPRQPLDVLAQQIVAEVACQEWREDDLYRLVIRAEPYAGLERERFDEVLRMLAEGYHS
RLGVRGAYLHRDALNGLLRGRRGARLTALTSGGTIPDTGDYSVLLEPQGLLVGTVNEDFA
VESLAGDVFQLGNTSYRIIRIEPGRVRVEDAQGQPPNIPFWLGEAPGRSDELSASVARLR
DTLDELLGEGQALPEGRRLEPAIAWLGATLGLDDGAARQIVEYLARARQALGGLPGSRRL
VLERFFDESGGMQLIIHSPHGSRLNRAWGLALRKRFCRSFNFELQAAATEDAIILSLSTS
HSFPLDEVWRYLHSASAEHLLVQAVLDAPLFGVRWRWNLTTSLGLPRYAGGRKVPPQLLR
MKSEDLLASVFPDQVACLENIVGEREVPDHPLVAQTLDDCLHEAMDCEGWLALLRDMESG
AVDLLARDLPAPSALAAEILTARPYAYLDDAPLEERRTQAVQNRRWSDPESADDLGALDL
EAIEAVRGEAWPEASNADEMHEALNSLGFLTSGEAEANPGWGEWLAQLSEQRRAGRLDCA
GSTLWLAAERLPAMRLVHPAAKVPDAFQAPRGYPPPDSAEAATVELTRARLGGFGPRTAG
QLAADLGIGLADQQYALAALEREGYVLRGRFSPGATEEEWCERHLLARIHRYTVKRLRRE
IEPVERADFMRFLFDWQRLAPGTRGRGAESLATVVEQLEGFQAAAAAWESELLAARVADY
ASHWLDQLCRSGRIVWARLAGRSKAAGGPLRSAPIVLLPRRELGLWSVLQRDAPEPELSP
RAARVLEVLREQGASFFDELSQDAHLLRSELENALGELVSVGRVNADSFAGLRTLLMPAD
KRSRQERRSRGLPGGMQDAGRWAPLRRAKAEEAGQRLPAEVLEHVARTLLRRYGVVAWRL
LEREADWLPPWRELLRVYHRLEARGEIRGGRFIAGLAGEQFALAEAVGLLREVRKRPPDG
AMLVVSAVDPLNLVGGLLPGERVPAVTGNRLLYRDGAPLAALVAGKVRMLAEVDGETAQQ
IRALLIRRH
NT seq 4350 nt   +upstreamnt  +downstreamnt
atgatgcctatttcatcctcttccgcccgccgcgccgagccggctccgcggcccctggcg
gagttccatcccgtcgtccgccagtggttcgaacgccacttcgccgcgcccacgccggcg
caggtggaggcctggccggcgatccgcgaggggctttcgaccctggtcgccgcgcccacc
ggttcgggcaagaccctgaccgccttcctcgccgccatcgatgccttggtggtggagggg
ctggccgccggcggcgagttggcggatgccacccaggtggtctatgtctcgccgctgaaa
gcgctgtccaacgacatccgcatcaacctggagcaaccgctggctggcatccgcgaggaa
ctggcgcgtctcggcctgcccgacgtcgatatccgtagcgcggtgcgcaccggcgatacg
ccgcaggtcgagcgcggagcgatgcgcaagcgcccgccgcacatcctggtcaccacgccc
gaatcgctgtacatcctgctcggctcggagtcgggccggcagatgcttgccggggtgcgc
agcgtgatcgtcgacgagatccatgccctggccggcagcaagcgcggcagccacctggcg
ctgtcgctggagcgcctgcaggcgctgtgtccgcgaccgctgctgcggatcgggctgtcc
gccacgcagaaaccgatcgagaaggtcgcgcgcttcctcgtcggcgccagcggcaatccg
cgcgatccggcctgccggatcgtcgacgtcggctatacgcgcccccgcgacctgggcatc
gaggtaccgccggtggcgctggaagcggtgatgtccaacgacacctgggagctggtctac
gaccgcctggcgcacctggccggcgagcaccgcaccaccctggtgttcgtcaacacccgg
cgcatggccgagcgggtcacccgcttcctcgccgaacgcctcggcagccgccaggtggcg
gcccaccacggcagcctggccaaggagctgcgcctggatgccgagcagcgcctcaaggcc
gggcaattgaaggtactggtggcgaccgcctcgctggagctgggcatcgatatcggcgac
gtcgagttggtctgccagttgtcgtcgccgcgctccatcgccgccttcctgcaacgggtc
gggcgttccgggcacagtgtcggcggcacccccaagggccggttgttcccgacctcccgc
gacgacctggtggaatgcgcggcgctgctcgacagcgtgcgccgtggcgagctggacagc
ctggtgctgccacgccagccgctggacgtgctggcgcagcagatcgtcgccgaagtggcc
tgccaggagtggcgcgaggacgacctctatcggctggtgatccgcgccgaaccctacgcc
gggctggagcgcgagcgcttcgacgaagtcctgcggatgcttgccgagggctaccactca
cgcctcggcgtgcgcggcgcctatctccatcgcgatgcgctcaacggcctgctccgtggc
cgccgtggcgcgcggctgaccgcgctgacctcgggcgggaccattcccgataccggcgac
tacagcgtgctgctggagccgcagggcctgctggtggggacggtcaacgaagatttcgcg
gtggagagcctggccggcgatgtgttccagctgggcaacacctcgtaccggatcatccgc
atcgagccgggacgggtacgggtcgaggacgcccagggccagccgccgaacattccgttc
tggctgggtgaggcgccggggcgcagcgacgagctgtcggccagcgtggcgcgcctgcgc
gacaccctcgacgagctgctcggcgaaggccaggcattgccggaagggcggcggctggag
ccagccatcgcctggctcggcgccaccctcgggctggacgatggcgccgcgcggcagatc
gtcgagtacctggcccgcgcccgccaggccctgggtggcctgcccgggagccggcggctg
gtgctggaacgcttcttcgacgaatccggcggcatgcaactgatcatccacagtccccac
ggcagccgcctcaaccgcgcctggggcctggcgctgcgcaagcgtttctgccgcagcttc
aacttcgagctgcaggcggcggccaccgaggacgcgatcatcctctcgctgtccaccagc
cacagctttcccctcgacgaggtctggcgctacctgcattcggcgagcgccgagcacctg
ttggtacaggccgtgctcgacgcgccgctgttcggcgtgcgctggcgctggaacctgacc
acctcgctcggtttgccgcgctatgccggcggtcgcaaggtgccgccgcaactgctgcgg
atgaagagcgaggatctgctggccagcgtgttccccgaccaggtggcgtgcctggagaat
atcgtcggcgagcgcgaggtgcccgatcacccgctggtggcgcagaccctcgacgactgc
ctgcacgaggcgatggattgcgagggctggctggccctgctgcgcgacatggagagcggc
gcggtggacttgctggcgcgcgacctgccggcgccttcggcgttggcggcggagatactg
accgcgcgtccctacgcctatctcgacgatgcgccgctggaggagcggcgtacccaggcg
gtacagaatcgccgctggagcgatcccgagtccgccgacgacctcggcgccctggacctt
gaggcgatcgaggcggtgcgtggcgaggcctggccggaagcgagcaacgccgacgagatg
catgaggcgctgaacagcctgggcttcctcacctcgggcgaggccgaggccaatccgggc
tggggggaatggcttgcgcaactgtcggagcaacgccgcgccggacgcctggactgcgca
ggcagcactctctggctggcggcggagcgcctgccggcgatgcgcctggtgcatcccgcg
gcgaaggtgcccgacgctttccaggcgcctcgcggctatccgccgccggactcggcggaa
gcggcgaccgtggagctgacccgcgcccgcctgggtggcttcgggccacgcacggccggg
cagttggcggccgacctgggcatcggcctggccgaccagcagtacgcgttggccgccctg
gagcgcgaaggctatgtgctgcgtggccgcttcagtcctggcgcgacggaagaggagtgg
tgcgaacgccatctgctggcgcgcatccatcgctatacggtgaagcgcctgcgccgggaa
atcgagccggtggagcgcgccgatttcatgcgttttctgttcgactggcagcgcctggcg
ccgggcacccgtggccggggtgcggagtccctggctacggtggtcgagcagctggaaggc
ttccaggccgcggcggccgcctgggaaagcgaactgctggcagcgcgggtggccgactac
gccagccattggctggaccagctgtgccgttccggacgcatcgtctgggcgcgcctggcc
ggacgcagcaaggccgccggcggtccgctgcgcagcgcgccgatcgtgctcctgccgcgc
cgcgagctggggctctggagcgtcctgcagcgcgacgcgccggagccggaactgtcgccg
cgcgcggccagggtactggaggtgctgcgcgagcagggtgcatcgttcttcgacgaactg
agccaggatgcccacctgctgcgcagcgagctggagaacgccctcggcgagctggtctcg
gtcggccgggtcaacgccgacagcttcgccgggctgcgcaccctgctgatgccggcggac
aagcgcagccgccaggagcgccgctcgcgcggcctgccgggcggcatgcaggacgccggg
cgctgggcgccgctgcgccgggcgaaggcggaagaggcggggcagcgtttgccggcggag
gttctcgaacatgtcgcccggaccttgctgcggcgctatggggtggtcgcctggcgcctg
ctggagcgcgaggccgactggctgccgccgtggcgcgagttgctgcgcgtctaccatcgc
ctggaagcgcgcggcgagattcgcggcgggcgcttcatcgccggcctggccggcgagcag
ttcgccttggcggaagcggtcggcctgttgcgcgaggtgcgcaagcgaccgccggatggg
gcgatgctggtggtgtcggcagtcgatccgttgaacctggtcggcggcctgctacccggc
gaacgggtgccggcggtgaccggcaaccgcctgctctatcgagacggagcgccgctggcg
gcgctggtagccggcaaggtgcggatgctcgcggaagtcgacggcgagaccgcgcagcag
atccgtgcgctgctgatccgccgtcactga

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