Pseudomonas aeruginosa PAO1-VE2: N296_4752
Help
Entry
N296_4752 CDS
T03170
Name
(GenBank) iclR helix-turn-helix domain protein
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
paei
Pseudomonas aeruginosa PAO1-VE2
Module
paei_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
paei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paei03000
]
N296_4752
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
paei01504
]
N296_4752
Transcription factors [BR:
paei03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
N296_4752
Antimicrobial resistance genes [BR:
paei01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
N296_4752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
HTH_31
TetR_N
HTH_AsnC-type
HTH_24
LacI
Xre-like-HTH
HTH_6
HTH_10
SpoIIID
MarR_2
HTH_Tnp_1_2
HTH_26
HTH_23
HTH_11
HTH_20
HTH_3
MerR
TetR_C_29
DUF6066
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AGY66001
LinkDB
All DBs
Position
5156641..5157204
Genome browser
AA seq
187 aa
AA seq
DB search
MTLISHDERLIKALAVAIVDRPRATLKELAEAAGVSKATLHRFCGTRDNLVQMLEDHGET
VLNQIIQACDLEHAEPLEALQRLIKEHLTHRELLVFLVFQYRPDFLDPHGEGARWQSYLE
ALDAFFLRGQQKGVFRIDITAAVFTELFITLVYGMVDAERRGRAASSNSAHTLEQMFLHG
ASNPARS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgatttcccatgacgagcgactcatcaaggcgctggcagtcgctatcgtcgac
cgcccgcgagcgacgctgaaggaactggccgaggcggccggcgtaagcaaggccaccctg
caccgcttctgcggcacgcgggacaacctggtgcagatgctcgaggaccacggagagacc
gtactgaaccagatcatccaggcctgcgacctggagcatgccgagcctctggaggcgttg
cagcgcctgatcaaggaacacctcacccaccgcgagctgctggtattcctggtattccag
taccgcccggacttcctcgacccgcacggcgaaggcgcacgctggcagtcctacctggaa
gcgctggacgccttcttcctgcgcggacagcagaaaggcgtgtttcgcatcgacatcacg
gcggccgtgttcaccgaactgttcatcaccctggtctacggcatggtcgatgcggaacgt
cgcggacgggcggccagctccaattccgcgcataccctggagcagatgttcctccatggc
gcctccaatccggctcgctcctga
DBGET
integrated database retrieval system
