KEGG   Paenibacillus sp. FSL H7-0737: H70737_05065Help
Entry
H70737_05065      CDS       T03359                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
paej  Paenibacillus sp. FSL H7-0737
Pathway
paej03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:paej00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    H70737_05065
Enzymes [BR:paej01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     H70737_05065
DNA repair and recombination proteins [BR:paej03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     H70737_05065
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AIQ22274
UniProt: A0A089JMM3
LinkDB All DBs
Position
complement(1146744..1147691)
Genome map
AA seq 315 aa AA seqDB search
MKLQPIIPFEPILAGQLPAGNQWIAQIKWDGVRMLSYYDGSTTQLINRRGNYRTAQYPEL
TDVNTYCKADSVILDGEIIALKDGKPSFHEVMRRDSLKNGSTISVVRYQVPVIYMIFDIL
FYNGQSTMDQPLFSRQQLLNDILLPHPHVQAVPSYTDPTELFAAAQSQSLEGIVCKDINS
TYAPGGKDKRWQKRKIISDITAVAGGVTFRDGIVNALLLGLYDDKGNLHYIGHAGPGKLT
VQDKRDLTAEVQHLKIDQMPFTTDPQRGKGAFWIKPKLVFKVHFLEWNTSGTLRQPVTQA
RVDLPPESCTMEQKG
NT seq 948 nt NT seq  +upstreamnt  +downstreamnt
atgaagcttcagcctattattccttttgaacccatactggctggacagcttccagcaggc
aaccagtggatcgcacagattaaatgggatggcgttcgcatgttgtcctattacgacgga
agcactactcagcttattaacagacgtggaaattaccgtacagcgcaataccctgagctt
actgatgtaaatacttattgcaaggctgattccgttattcttgatggtgaaatcattgca
ctcaaggacggcaagccctcatttcacgaagttatgcggagggatagcttaaagaatggc
tccaccatttccgtcgttaggtatcaggttcctgtcatttatatgatttttgatattctg
ttttataatggccaatcgacgatggatcagcctttattctcacggcagcagctgctaaac
gatattctgctgccgcatccccacgtacaggccgtacccagttataccgatcccacagaa
ttattcgccgccgctcagagtcagagcttagagggaatcgtctgtaaggatatcaacagt
acttatgctcccggtggaaaagataaacgctggcagaaacgcaaaatcatttcggatatt
acggcagtagccggaggtgtaaccttccgtgacggcatcgtcaatgcgcttcttcttggg
ctgtatgatgataaagggaatttgcattatatcggacatgccgggccaggaaaattgact
gtacaggataaacgcgacttaactgcagaggtacagcatttaaaaatagatcaaatgccc
tttacaactgatccccagcgagggaagggtgctttttggataaaaccgaagcttgtcttc
aaagttcattttttggaatggaatacctcaggcactctgcgccagcctgttactcaagct
agggtagatcttcccccggaatcatgcactatggagcaaaaaggataa

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