Paenisporosarcina cavernae: D3873_01905
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Entry
D3873_01905 CDS
T05647
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paek
Paenisporosarcina cavernae
Pathway
paek03420
Nucleotide excision repair
paek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D3873_01905
03430 Mismatch repair
D3873_01905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paek03400
]
D3873_01905
Enzymes [BR:
paek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3873_01905
DNA repair and recombination proteins [BR:
paek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D3873_01905
MMR (mismatch excision repair)
Other MMR factors
D3873_01905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
AAA_30
AAA_14
DEAD
ResIII
SLFN-g3_helicase
AAA_11
NACHT
T2SSE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AYC28684
UniProt:
A0A385YQ86
LinkDB
All DBs
Position
complement(364655..366910)
Genome browser
AA seq
751 aa
AA seq
DB search
MTQKHPDFEKERHRLAYTKDYMEQLLVESQRDVQSAQENIRQSMADLDYLDSSLSYLNIL
TNARFFEMARSQREGLEAIRQKPYFARIHFQKDGEEAEELYIGKTSLFHRDTQEPIIVDW
RSPVANVYYDGRLGDIEYDVRGERNHGHLFSKRQYTIEDGELLDVRDIDLTTNDELLQEA
LSGKADVRLTEIVSTIQAEQNEIIRAHLKQPIIVQGAAGSGKTTIALHRISYFLYTMGEH
FPAEKLMILAPSQLFMGYIADVLPELGVGKIQQTTFSDYVQAATSSKLKLRDANEKLAML
MEKEALDEQTAWISRWKGSLVCKSLIDQYLAELEKDITHLFDDIYLEKYRIMRKERLQQL
FLTEFAYMPVEKRLARIKTVLQSHVRQKKKELLHLLAKKYDEALDKALFGLRDADKRKEQ
TTRLIDERDHRLPIIEKQSKTLVSSYMKRFTKHKTKDLVQSFYLAVPSLANWTEAQTASF
LTYQSSIEWENEDLASLFYMQAKWKGISEEHKMRVVFIDEVQDYSEFQLAALKEGLETDM
FTMVGDLAQGIHSYRSLTNWDGVLDLFPRANFQTLQKSYRTTIEIMTVANQLLEQMEENL
PLVEPVVRHGILPQFHPADSLTPDYVKVLLDKIKASGHRSIAIITKTAVEAKRLYGQLKK
TLAVQLLQEGEEIDPSCTLIVPSHLAKGLEFDAVIVTALDSVYRDHPIDRKLLYVAMTRP
MHELHLVAPSISHFLFTESMISDKNLLDVVS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaaacatccggattttgaaaaagaacgacaccgcttagcctacacaaaagat
tacatggagcaacttctagtagagtcgcaacgagatgttcaatccgcacaagagaacatt
cgacaatccatggccgacctcgattatttagattccagtttgagttatttgaatatctta
accaatgcaaggttttttgaaatggcacgttctcagcgagaaggattagaggctattcgt
caaaagccttattttgcgcggatccatttccaaaaagatggagaagaggcggaagaactt
tacataggaaagacttctcttttccatcgagatacacaggagccaattattgtggactgg
cgctcccctgttgcaaatgtctattatgatggacggctcggagatattgagtatgacgtg
cgaggcgaacgaaatcatggacatctcttttcgaagcgtcagtatacaattgaagatgga
gaattattagacgtacgagacattgatttaacgactaatgacgaactgttacaagaagcg
ttgtctggaaaggcagacgtgcgactaacagagattgtctcgacaattcaagccgaacaa
aatgaaatcattcgcgctcacttaaagcagccgattattgtgcaaggtgcagcaggaagc
ggtaaaacaacgattgcgcttcaccgaatctcgtactttctttatacgatgggcgaacac
ttccctgccgaaaaattaatgattttagctccttcccagttatttatggggtacattgcg
gatgtacttccagaacttggcgttgggaaaatccaacaaaccaccttcagtgattatgtc
caagctgcaacctctagtaagttgaaattgcgtgatgccaatgaaaagcttgccatgctg
atggaaaaagaagcgctcgatgaacaaactgcttggatttctagatggaaaggatcgctt
gtttgtaaatcattaatagatcagtacttggctgagcttgaaaaggatattacgcatttg
tttgatgatatttatttagagaaatatcgcattatgcgtaaagaacgattgcagcaattg
tttctaaccgaatttgcttacatgcctgttgaaaaacgattagcacgtattaaaacggta
ttacaatcgcacgttcgacaaaaaaagaaagaacttcttcatttattagcaaaaaaatat
gatgaagcgctcgataaagctttgtttgggttgcgagatgctgacaaacgaaaagaacaa
acgacaaggctaattgatgaacgcgatcaccgtttacctatcattgaaaaacaatcgaaa
acgctcgtttcttcctatatgaagcgatttacaaagcataaaacgaaagatcttgtccaa
tcattttatttagcagtgcctagcttagcgaattggacagaagcccaaacagcttcgttt
ttaacgtaccaatcatcgattgaatgggaaaatgaggatttagctagtctgttttatatg
caagctaagtggaaagggatttcggaggagcacaaaatgcgggtcgtctttatcgatgaa
gtccaggattatagtgaatttcaacttgcagcgttaaaagagggcctggaaacggatatg
ttcacaatggttggcgatctcgcgcaaggaatacacagctaccgttcccttacgaactgg
gatggggtactggatttattcccaagagcgaacttccaaacattacaaaagagctaccgt
acaaccattgaaattatgactgttgccaatcaattactcgagcaaatggaagagaatttg
ccactagtcgaaccagttgtgagacatggaatcttacctcaattccatcctgccgattct
ctcacaccggactatgtgaaagtgttactagataaaattaaagccagtggacaccggtca
atcgctatcattacgaaaacggctgtggaagcaaaacgtctttatgggcaattaaaaaag
accctcgctgttcaacttttacaagaaggcgaagaaattgatccttcgtgtaccttaatt
gttccaagtcatttagcaaagggtcttgaatttgacgctgtcattgtaactgcattagat
agtgtgtaccgtgatcacccaattgaccgtaaattattgtatgtggcgatgacgcgaccg
atgcatgagttacatttagttgctccaagtatctctcattttcttttcaccgaatctatg
atttctgataaaaatctacttgatgttgtttcgtga
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