Paenisporosarcina cavernae: D3873_04610
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Entry
D3873_04610 CDS
T05647
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
paek
Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paek03009
]
D3873_04610 (rsmB)
Enzymes [BR:
paek01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
D3873_04610 (rsmB)
Ribosome biogenesis [BR:
paek03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D3873_04610 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
FtsJ
Methyltransf_25
Ubie_methyltran
Methyltransf_11
Methyltr_RsmF_N
Methyltransf_4
NSUN5_fdxn-like
BMT5-like
Methyltransf_24
Methyltransf_12
PCMT
Cons_hypoth95
MTS
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AYC29195
UniProt:
A0A385YQZ7
LinkDB
All DBs
Position
924131..925492
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AA seq
453 aa
AA seq
DB search
MSKKTTKIWRGNVRDAALSILLSVEKNQSYSNLLLHQTIETYDISDQDRALLTELTYGCI
QRKLTLDYFLEPFVKGKLESWVRLLLHLSIYQLVYLDRIPNHAIVHESVEIAKKRGHKGV
AAVVNGILRSILREGVRSIEEIDDENLQLSIASSHPLWLVERWVKQFGYEKTAEMVHTNN
VPPVQTVRVNLMKTTPDVVIQAFQEEGIEVEQSRFVPECLYVMKGSIAKTDLFKHGFVTI
QDESSMIPSLLLDVEKDNRILDMCAAPGGKTTHIAERLNATGSLTSVDLHAHKVKLIDEQ
VQRLELDNVHTIVANSKELSDILEEESFDRILVDAPCSGLGVIRRKPDIKYTKQASDFDS
LHVTQLQLLDEASRLLRPEGRLVYSTCTIEATENNETVQAFLAKHPEMELLKDVALPESL
TRFYSDGMMQLFPQDLNSDGFFIAVFRKKGVSQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaaccacgaaaatttggagagggaacgtacgagatgcggcattatcgatt
ttactctcagtggagaaaaatcagtcgtatagcaatctcctgcttcatcaaacaatcgaa
acgtacgacatctctgaccaagatcgtgctttattaacagaactgacgtatggttgtatt
cagcggaaattaacacttgattactttcttgaaccatttgtaaaagggaaattagaatcg
tgggttcgcttgcttctccacctttcgatttatcagctagtatatttagatcgaatcccc
aatcatgcgattgtgcatgagtctgtggaaatcgcaaaaaaacgtggacataaaggagta
gctgctgtcgtaaatggtattttgcgaagcatattaagagaaggtgtcagaagtattgaa
gagattgacgatgaaaacttgcagttatcgatcgcttctagccatccactttggcttgtg
gaacgatgggtgaagcagtttggctacgagaaaacagcagaaatggtgcacactaataat
gtcccacccgttcaaactgttagagtaaacttgatgaaaaccacaccagatgtagtgatt
caagcatttcaagaagaaggcattgaagtggaacaaagtagatttgttcccgagtgtcta
tatgtgatgaaaggatcgattgcaaagaccgatttgtttaaacatggttttgtgacgatt
caagacgaaagttccatgattcctagtttgcttttagatgttgagaaggataatcgtatc
ctagacatgtgcgcagcaccaggagggaaaacaacgcatatagcagaaagattgaatgcc
actggttctctcacttctgttgacttgcatgcacataaagtaaaactaattgacgaacaa
gtgcaacgattggaacttgataatgttcatacaattgtagcaaatagtaaagaattatcg
gatatactagaagaggaatcgtttgatcgaattttagtcgatgctccttgtagcggttta
ggagttattcgaagaaaaccagatataaagtacaccaaacaagcatctgattttgactct
cttcatgtcacacaattacagttgttagacgaagcatctcgacttttacgacctgagggt
cgattagtatatagtacatgcaccattgaagccacggaaaataacgaaacggtccaggca
tttttagcaaaacatcctgagatggaattactcaaggatgttgcattaccagaaagtttg
acaaggttttactctgacggaatgatgcaattatttccgcaggacctcaacagtgacgga
ttctttatcgctgtgtttcgaaaaaaaggagtttctcaataa
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