Paenisporosarcina cavernae: D3873_09950
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Entry
D3873_09950 CDS
T05647
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
paek
Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paek03019
]
D3873_09950 (yhaM)
Messenger RNA biogenesis [BR:
paek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D3873_09950 (yhaM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
CTD12
HBM
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AYC30822
UniProt:
A0A385YZN2
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All DBs
Position
complement(1930395..1931336)
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AA seq
313 aa
AA seq
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MKGITTLGVGEAVDHFLLIKQATKAVTTQGSPFMTLILQDKSGDIEAKLWDTTDEHERLY
HPEAIVRVGGEIHHYRGKNQLRIKSIRPMKEEEGIQLSDLVPAAEKPKEVLMEELQQFLF
EMQNANIQRLTRHILKKYQTKIMTYPAATKNHHDYVSGLIDHVVSMLKLGKALCELYPTL
NRDILYAGIILHDIGKVRELSGAIATSYTVEGNLLGHITIMVTEIDKAAEELQIEGEEVM
VLQHLVLSHHGKEEWGSPKKPMIREAEILHYIDNIDAKMNMLNRALKKTPPGEFSERMFP
LDNRSFYRPTFDE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtattacaactttaggagtaggagaagcagttgatcacttcctgttaattaaa
caagcgacaaaagcggttacgacgcaaggaagtccttttatgacgctgatacttcaagat
aagagtggcgatattgaagcgaaactgtgggatacaaccgatgaacatgaaagactatat
catccagaggcaattgttcgagtgggtggagaaattcatcactatcgagggaaaaatcaa
ttgcgcattaaaagcattcgtcctatgaaggaagaagaaggaattcaactgagcgattta
gtgccagcagcggaaaaaccgaaagaagtgctaatggaagagttgcaacaatttctgttt
gaaatgcaaaatgcaaatattcaacgtttaactcgccatattcttaaaaaataccaaacg
aaaattatgacgtacccagctgcaacgaaaaatcaccatgactacgtgtcaggactaatc
gatcacgttgtctcgatgctaaagttaggaaaagcactttgtgagctgtatcctacatta
aatcgcgatattttatatgcaggaattatcctacacgatattggcaaggtgagagagctc
tcaggtgcgattgcaacatcttatacggtcgaaggaaatttgctaggtcatattaccatt
atggtgacggaaattgataaggctgcagaagaattgcaaattgaaggggaagaagtaatg
gtgctccaacacctcgtactttctcatcacggaaaagaagagtggggaagcccgaaaaaa
ccgatgattcgtgaagcagaaattcttcattacattgataacatagatgcgaagatgaat
atgctgaatcgtgcattgaagaaaacacctcctggagaattctccgaaagaatgtttcca
cttgataatcgttctttctaccgacctacctttgatgaatag
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