Pseudomonas aeruginosa MTB-1: U769_19280
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Entry
U769_19280 CDS
T02951
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
paem
Pseudomonas aeruginosa MTB-1
Brite
KEGG Orthology (KO) [BR:
paem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paem03016
]
U769_19280
Enzymes [BR:
paem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
U769_19280
Transfer RNA biogenesis [BR:
paem03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
U769_19280
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Ribosomal_L27_C
Motif
Other DBs
NCBI-ProteinID:
AHB57091
LinkDB
All DBs
Position
complement(4172074..4173204)
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AA seq
376 aa
AA seq
DB search
MFVTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLI
DPLLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHS
MGYSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEEKR
AWLLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRELCAWREEQARLRNRPRN
HVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAQAARLPQSEWPEALP
EPLPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKILEALLKSGYPDGPYELPDSLRGW
RRERMGQALLDALESA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgaccgcgcccgaaatccagtggatccgcgatgatgccagcctggcgcagcaa
tgccgggaatggcgcacacagccgtacctcgcgctcgataccgagttcatgcgcgtcgat
accttctatcccgcggccggtctggtgcaggtgggcgatggccggcaggagtggctgatc
gatccgctgctgatccaggactggagtcccttcgccgaactgctcgaagacgagcgggtg
gtgaaggtgctgcacgcctgtagcgaagacctcgaggtgttcctgcgcctcaccggcagc
ctgccggtgccgctgttcgatacgcagttggccgccgcctatctcggtatggcccattcg
atgggctattcgaagctggtgaaggaggtgctggacatcgacctgcccaaggacgagacc
cgttccgactggttgcaacggccgctcaccgagatgcagatgcgctacgccgccgacgac
gtccagcacctcgcccaggtctacctggccctggatgcgcggctgagcgaggagaaacgc
gcctggctgctggaggacggcgccgaactggtcgccaacctctgccgcgagagcgatccg
cgcgaggcctaccgcgaggtcaagctgggttggcggctgcgtccgcagcaactggcggtg
ctccgcgaactctgcgcctggcgcgaggagcaggcacgcctgcgcaaccggccgcgcaac
cacgtgctgcgcgaacgcaccctgtggccgctggcgcgcctgctgccgaagaacaagacc
gacctggcggcgatcgaggacatgcatccgcgcaccgtgcgccaggacggcgacttcctc
atcgaactgatcgcccaggctgcgcgcctgccgcagagcgaatggcccgaggcgctgccc
gagccgctgccgccggaggtcaccccgctgctcaagagcctgcgcgccatcggccagcgc
gaagcggagaccctgggcatggcgcccgagctgatgctgcgcaagaagatcctcgaggca
ctgctcaagagcggctatcccgacggtccctacgaactgcccgattccctccgcggctgg
cgccgcgaacgcatgggccaggccctgctggacgccctggagagcgcatga
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