Paenibacillus sp. FSL R5-0912: R50912_01830
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Entry
R50912_01830 CDS
T03334
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03420
Nucleotide excision repair
paeq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R50912_01830
03430 Mismatch repair
R50912_01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_01830
Enzymes [BR:
paeq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50912_01830
DNA repair and recombination proteins [BR:
paeq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50912_01830
MMR (mismatch excision repair)
Other MMR factors
R50912_01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AIQ38927
UniProt:
A0A089JSB7
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All DBs
Position
complement(403664..406000)
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AA seq
778 aa
AA seq
DB search
MNKLLFHNIPLGATGEKIPQAKVASARTSRETVKPGDSDAAYFRRLEEGGILLNSPQISA
VRHHLGPLLTLAGAGSGKTSVLICRTGYLLSVRGIAPGRLLLLTFSSKAAAEMRERIAVL
PGVNAGDAARLQARTFHSFFLYFLRRQGLRQDIFHETRRQHILLKQIMRQLGLPKDAYPP
ENLLTLLSSCKMNMGLPEDMPETTEAEKEMKAILALYEQWKTEHFKIDFDDVLLIAYRML
REQPALLLELQQKYQYVMVDEFQDTNALQYELVKMIAHPQDNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPNAKVITLDINYRSGPAIIGLGNGIIRHNTRRRAKTLQAAKSSGNPPRY
LRPQTADEEAEQIVEHIEREIGSGAREYRDYALLYRATSSNRAILELLLMRDIPYVDYGE
GQLLYEHWLISPVLDHLRLSVNRRNFAAMENILPTLYMSREKGMEHIRRMESVQAKQGPL
IHLLSMPGMEDFKATKLRERLDLIRGLSGLTPVQAIRQIRTVFYDYFIEANERHQATLHR
ETLKEMLDELEASAERFGTIPLFLEFIDNVTERNEQSRQPGLKEQGNRIALMTIHKSKGL
EFPVVFLIGASEGILPHSSALEEGRLKDRKPAKASVTVVGSAAARAAAEAGIAALEEERR
LAYVAVTRAREELFISSPARHRGKKAEVSRFMLSAFRAAAPPQATAPAAGNRSTVVRSSY
SSGSSAARMHTVPVWSCSGKSCPGWTRMKAGGAEDHLASKPCPLCKSPMEKSTREVPV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctattatttcataatataccgctcggtgctaccggcgagaaaatcccccag
gcgaaggttgcctccgcccggacgagcagggagaccgtgaaacccggagacagcgacgcg
gcttacttccgcaggctggaggaaggcggcattctgctcaattctccgcaaatctcagcg
gtgcggcatcatctcgggccgctgctgacgctggcgggagcaggctccggcaaaacctcg
gtgctgatctgcagaaccgggtatttgctgtctgtgcgcggcatcgccccgggccggctg
ctgctgctcacgttctccagcaaggctgcggcggaaatgcgggagcggattgccgtgctg
ccgggtgtgaacgcaggtgatgccgcacggctgcaggcccgcacgttccactcgttcttc
ctctatttcctgcgccgtcagggactgcggcaggatattttccacgagacgcggcgccag
cacatcctgctgaagcagatcatgcgtcagcttgggctgccgaaggatgcctatccccca
gagaatctgctcaccttgctctcctcctgcaagatgaatatgggcttgcccgaggatatg
ccggaaacgacagaagcggagaaggaaatgaaggccattctcgccctgtacgagcagtgg
aagaccgaacatttcaaaatcgatttcgacgacgtgctgctgatcgcctaccggatgctc
cgggagcagccggcgctgctgctggagctgcagcagaaataccaatatgtaatggtcgat
gaattccaggatacgaatgcgctgcaatatgagctggtcaaaatgatcgcccatccacag
gacaacctgatggtggtcggagacgatgatcagaccatctattccttcaacggggcgcgc
agcgagttcattctggagttcgagaaactgtatccaaatgccaaggtgatcaccctcgat
atcaattaccgctccggaccggccattatcgggctcggtaacgggattattcgccataat
acacggcgccgggccaagacgctgcaagcggccaaaagcagtggaaatccgccccgctat
cttcgtccgcagactgcggacgaagaggccgagcagattgtagagcatattgaacgtgag
attggcagcggagcaagggaatatcgcgattatgcgctgttgtaccgcgccaccagcagc
aaccgggcaatcctagagctgctgctgatgcgcgatatcccttatgtagactacggcgaa
ggccagctgctctacgagcattggctgatctcccccgtgctggatcatctgcgcctgtct
gttaaccgccgtaacttcgccgcgatggagaatattctgccgaccctctacatgagccgg
gaaaaagggatggagcatatccgccgcatggagtccgtgcaggcgaaacagggcccgctg
attcacctcctgtccatgccgggcatggaggatttcaaagctaccaagctgcgcgagcgg
ctggatctgatccgcgggctgagcgggctgacgccggtgcaggcgatccgccagatccgc
actgttttctatgactatttcattgaagccaatgaacggcaccaggccacattgcaccgg
gagacgcttaaggaaatgctcgatgagctggaggcatccgcagagcggttcggcacgatc
ccgttgttcctcgaattcattgataacgtaaccgagcgcaacgagcagagccgtcagccg
gggcttaaggagcaaggcaaccgcatcgccctgatgactatccataaatccaaaggactg
gagttccccgtagtcttccttatcggggcttccgagggtattctgccgcatagctccgca
ctggaggagggccggctgaaggaccgcaagccggcgaaggcaagcgttactgtggtcggc
agtgctgccgccagagccgcagctgaggctggaatagctgcactcgaagaggaacgcaga
ctcgcctatgtagccgttacccgggcccgcgaggagctgttcatcagctcgcccgcaagg
caccggggcaagaaggcagaggtctcgcgcttcatgctctccgccttccgcgctgcagca
ccgcctcaggcaactgcaccggccgccggaaacagaagcactgtagtacgcagcagctat
tcgtccgggtcctctgcagccagaatgcatacagttcccgtctggagctgttccgggaag
tcctgcccgggctggacccggatgaaggcgggcggagccgaggatcaccttgcctcgaag
ccctgtccgctgtgcaaatccccgatggaaaaaagcacccgggaagtccctgtataa
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