Pseudomonas aeruginosa PA1R: PA1R_gp2874
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Entry
PA1R_gp2874 CDS
T02929
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
paer
Pseudomonas aeruginosa PA1R
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paer03019
]
PA1R_gp2874
03009 Ribosome biogenesis [BR:
paer03009
]
PA1R_gp2874
Messenger RNA biogenesis [BR:
paer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PA1R_gp2874
Ribosome biogenesis [BR:
paer03009
]
Eukaryotic type
Pre-60S particles
RNases
PA1R_gp2874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHA24600
LinkDB
All DBs
Position
complement(3199804..3200346)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEILAGMDEW
NTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMP
RLEGYFHYRNLDVSTLKELAARWAPQVRESFKKGNTHLALDDIRESIAELRHYRDHFIKL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccgcagaaccttatctggatcgacctggagatgaccggcctcgatccggac
cgggacgtcatcatcgagatggccaccatcgtcaccgacagtgacctcaacaccctggcc
gaaggaccggtgatcgccatccaccagccagaggaaatcctcgccggcatggacgagtgg
aatacccgccagcacggccagtccggcctgacccagagggttcgggaaagtaccgtgagc
atggccgaggccgaggcgcagaccctggccttcctcgagcagtgggtgcccaagcgcagc
tcgccgatctgcggcaacagcatctgccaggaccgccgcttcctctataggcacatgccc
aggctggaaggctacttccactaccgcaacctcgacgtctccaccctcaaggagctggcc
gcgcgctgggcgccgcaggtccgcgagagcttcaagaagggcaacacccacctggcgctg
gacgatatccgcgagtcgatcgccgagctgcgccactaccgcgaccacttcatcaagctc
tga
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