Pseudomonas aeruginosa SCV20265: SCV20265_1415
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Entry
SCV20265_1415 CDS
T02971
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes03030
DNA replication
paes03430
Mismatch repair
paes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCV20265_1415
03430 Mismatch repair
SCV20265_1415
03440 Homologous recombination
SCV20265_1415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paes03032
]
SCV20265_1415
03400 DNA repair and recombination proteins [BR:
paes03400
]
SCV20265_1415
Enzymes [BR:
paes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCV20265_1415
DNA replication proteins [BR:
paes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCV20265_1415
DNA repair and recombination proteins [BR:
paes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCV20265_1415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AHC75529
LinkDB
All DBs
Position
1483698..1487255
Genome browser
AA seq
1185 aa
AA seq
DB search
MSFLRYFCSGAFMTVSFVHLRLHTEFSLVDGLVRVKPLAKAVAGLGMPAVAVTDQSNMCS
LVKFYKTAMGAGIKPICGADIWLASREEDGPLSRLSLLAMNAKGYRNLTELISRGWSEGQ
RNGEIIIERDWVKEAAEGLIALSAAKEGEIGHALLDGEEAKAEALLREWMEVFPERFYVE
VQRTSRVNDEEHLHAAVALASRCNAPLVATNDVRFIKQEDFEAHETRVCIGEGRTLDDPR
RPRTYSDQQYLKSPAEMAELFSDLPEALENTVEIAKRCNIEVQLGKYFLPDFPTPNGMGI
DDYLRHASFEGLEERLEVLLPKDTPDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDF
IKWAKNNGVPVGPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFC
MEGRDRVIDYVADAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEV
GMTLDKAYEQEEMLRDFLKSDEEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSP
IACDEEGGGLVTQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKGLEPVNID
FIPLDDKPTYSLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGM
VDDFINRKHGRAELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADM
LRRAMGKKKPEEMAKQRGGFIEGCKNNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLV
SYQTAWLKTHFPAPFMAAVLTADMQNTDKVVTLIEECRHMKLRIVAPDVNNSEFRFTVDD
DGRIVYGLGAIKGVGEGPVEAITECRAEGGPFNTLFDFCDRVDLKRINKRTLEALIRAGA
LDRLGPHYHDELKAYQATVDLNRAVLLAAMEEAIQAAEQTARSHDSGHMDLFGGVFAEPE
ADVYANHRKVKELTLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQ
TVAGLIVNLRVMKNKKGDKMGFVTLDDRSGRIEASLFSEAFAAAQSLLQTDALVVVEGEV
SQDDFSGGLRLRAKRVMSLEEARTGLAESLRMKLHADLLKGDRLRWLGELFNRHRGSCPI
TLDYTSADAKALLQFGESWRVDPADDLIQALRDQFGRDNVFLNYR
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtttttgcgttatttctgctccggggccttcatgaccgtatccttcgttcacctg
cgtctgcataccgaattctccctggtcgacggcctggtccgggtcaagcccctggccaag
gcagtggcagggctgggcatgccggcggtggcggtcaccgaccagagcaacatgtgctcg
ctggtgaagttctacaagaccgccatgggcgccggcatcaagccgatctgcggggccgac
atctggctcgccagccgcgaggaagatggcccgctcagtcgcctgagcctgctggcgatg
aacgcgaagggctatcgcaacctcaccgagctgatttcccgcggttggagcgaaggccag
cgcaacggcgagatcatcatcgagcgcgactgggtcaaggaggcggcggaaggcctgatc
gcgctgtccgcggccaaggagggcgagatcggccacgcgctgctcgacggcgaggaagcc
aaggccgaggcgctgttgcgcgagtggatggaggtgttccccgagcgcttctacgtggaa
gtgcaacgtaccagccgggtcaacgacgaggagcacctccacgcggcggtggctttggcg
tcacgctgcaacgcgccgctggtggcgaccaacgacgtgcgcttcatcaagcaggaagac
ttcgaggcccacgagacccgcgtctgcatcggcgaggggcggaccctcgacgatccgcgg
cggccgcgtacctattcggaccagcaatacctgaagtcgccggcggaaatggccgagctg
ttcagcgacctgccggaagcgttggaaaacaccgtcgagatcgccaaacgctgcaacatc
gaggtgcagctgggcaagtacttcctgccggacttccccacgcccaatggcatgggcatc
gacgactacctgcggcacgcctccttcgaaggtctcgaggagcgcctggaggtgctgttg
ccgaaggacaccccggactacgaggccaagcgccaggtctatgtcgatcgcctgaacttc
gaactcgatatcatcatccagatgggtttccccggttacttcctcatcgtgatggacttc
atcaagtgggcgaagaacaacggcgtaccggtaggccccgggcggggctcgggcgccggc
tcgctggtggcctacgtgctgaagatcaccgacctcgatccgctggcctatgacctgctg
ttcgaacgtttcctcaacccggaacggatctccatgcccgacttcgacgtcgacttctgc
atggagggccgcgaccgggtgatcgactacgtggccgacgcctacgggcgcaacgcggtg
agccagatcatcaccttcggcaccatggcggcgaaggcggtggtacgcgacgtggcgcgg
gtccagggcaagtcctacggtctcgccgaccggctgtcgaagatgatcccgttcgaagtc
ggcatgaccctggataaggcctacgagcaggaagaaatgctccgcgacttcctcaagagc
gacgaggaagccgccgagatctgggagatggccctcaagctggaaggcatcactcgcggt
accggcaagcacgccggtggcgtggtgatcgcgccgaccaagctgaccgacttctcgccg
atcgcctgcgacgaggaaggcggcggcctggtgacccagttcgacaaggacgacgtggag
gcggccggcctggtgaagttcgacttcctcggcctgcggaccctgaccatcatcaagtgg
gcgatggagatcatcaaccgcgagcaggccaagaagggcctggagccggtgaacatcgac
ttcatcccgctggacgacaagccgacctattcgctgctgcagaaggccgagaccactgcg
gtgttccagctcgaatcgcgcggcatgaaggagctgatcaagaagctcaagccggactgc
ctggaagacctcatcgcactggtggcgctgttccgcccgggtcctctgcagtcgggcatg
gtggacgacttcatcaaccgcaagcacggtcgcgccgagctgtcctatccgcaccccgat
taccagtacgccggcctggagccggtgctcaagcccacctacggcatcatcctgtaccag
gaacaggtgatgcagatcgcccaggtcatggccggctataccctcggtggcgcggacatg
ctgcgccgggcgatgggcaagaagaagcccgaggaaatggccaagcagcgcggcggtttc
atcgagggttgcaagaacaacggcatcgatgccgacctcgcgggcaacatcttcgacctg
gtggaaaaattcgccggctacggcttcaacaagtcgcactcggcagcctacggcctggtc
tcctaccagaccgcctggctgaagacccacttcccggcgccgttcatggccgcggtactc
accgcggatatgcagaacaccgacaaggtggtgacgctgatcgaagaatgccggcacatg
aagctgcgcatcgtggcgccggacgtgaacaactccgagttccgcttcaccgtcgacgac
gatggccggatcgtctatggcctgggcgcgatcaagggcgtcggcgaggggccggtggag
gcgatcaccgaatgccgcgccgaaggcgggccgttcaacaccctgttcgacttctgcgac
cgcgtcgacctgaaacgcatcaacaagcgcaccctggaagcgctgatccgcgccggtgcg
ctggatcgcctggggccgcactaccacgacgagctaaaggcctaccaggctaccgtcgac
ctcaaccgcgccgtgctgctggcggcgatggaggaagcgatccaggccgccgagcagacc
gcgcgcagccacgacagcgggcacatggacctgttcggcggagtcttcgccgagccggag
gcggatgtctacgccaaccaccgcaaggtcaaggagctgaccctcaaggaacgcctgaag
ggcgagaaggacaccctcggcctgtacctgaccggccatccgatcgacgagtacgaaggc
gaggtgcggcgcttcgcccgccagcgcatcgtcgagctgaagccggcgcgcgatacccag
acggtggccgggctgatcgtcaacctgcgggtgatgaagaacaagaagggcgacaagatg
ggcttcgtcaccctcgacgaccgctccggacggatcgaggcctcgctgttctccgaagcc
ttcgccgcggcccagtcgctgctgcagaccgacgcgctggtggtggtcgagggcgaggtc
agccaggacgacttctccggcggactgcgcctgcgcgccaagcgcgtgatgagcctggag
gaggcgcgtaccggcctggcggagagcctgcggatgaagctgcacgccgacctgttgaag
ggcgatcgcctgcgctggctgggcgagctgttcaaccgccatcgcggttcctgcccgatc
accctggactacaccagcgccgacgccaaggccctgctgcagttcggcgagagctggcgg
gtggatccggcggacgatctgatccaggcattgcgtgaccagttcgggcgcgacaacgtc
ttcctcaattatcgttaa
DBGET
integrated database retrieval system
