Pseudomonas aeruginosa SCV20265: SCV20265_1565
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Entry
SCV20265_1565 CDS
T02971
Name
(GenBank) transcriptional regulator RhlR
KO
K18099
LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes02024
Quorum sensing
paes02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCV20265_1565
02025 Biofilm formation - Pseudomonas aeruginosa
SCV20265_1565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paes03000
]
SCV20265_1565
Transcription factors [BR:
paes03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SCV20265_1565
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_20
HTH_23
HTH_28
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AHC75679
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All DBs
Position
1649586..1650290
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AA seq
234 aa
AA seq
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MLWWDGLRSEMQPIHDSQGVFAVLEKEVRRLGFDYYAYGVRHTIPFTRPKTEVHGTYPKA
WLERYQMQNYGAVDPAILNGLRSSEMVVWSDSLFDQSRMLWNEARDWGLCVGATLPIRAP
NNLLSVLSVARDQQNISSFEREEIRLRLRCMIELLTQKLTDLEHPMLMSNPVCLSHRERE
ILQWTADGKSSGEIAIILSISESTVNFHHKNIQKKFDAPNKTLAAAYAAALGLI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttgctgtggtgggacggtttgcgtagcgagatgcagccgatccacgacagccagggcgtg
ttcgccgtcctggaaaaggaagtgcggcgcctgggcttcgattactacgcctatggcgtg
cgccatacgattcccttcacccggccgaagaccgaggtccatggcacctatcccaaggcc
tggctggagcgataccagatgcagaactacggggccgtggatccggcgatcctcaacggc
ctgcgctcctcggaaatggtggtctggagcgacagcctgttcgaccagagccggatgctc
tggaacgaggctcgcgattggggcctctgtgtcggcgcgaccttgccgatccgcgcgccg
aacaatttgctcagcgtgctttccgtggcgcgcgaccagcagaacatctccagcttcgag
cgcgaggaaatccgcctgcggctgcgttgcatgatcgagttgctgacccagaagctgacc
gacctggagcatccgatgctgatgtccaacccggtctgcctgagccatcgcgaacgcgag
atcctgcaatggaccgccgacggcaagagctccggggaaatcgccatcatcctgagcatc
tccgagagcacggtgaacttccaccacaagaacatccagaagaagttcgacgcgccgaac
aagacgctggctgccgcctacgccgcggcgctgggcctcatctga
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