Pseudomonas aeruginosa PA38182: BN889_05264
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Entry
BN889_05264 CDS
T03031
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
paeu
Pseudomonas aeruginosa PA38182
Pathway
paeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN889_05264 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paeu03019
]
BN889_05264 (pcnB)
Enzymes [BR:
paeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BN889_05264 (pcnB)
Messenger RNA biogenesis [BR:
paeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BN889_05264 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CDI93286
LinkDB
All DBs
Position
5495539..5496942
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AA seq
467 aa
AA seq
DB search
MLKKLIQTIRSPLRRPRAVRTTPEVIGNNQHSLRRDQFSRNAVKVVEILQRAGYQAYVVG
GCVRDQMLGIAPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHVHFGREIIEVATFRAH
HPEGQDDGDSRASSNESGRILRDNVYGSLEDDAQRRDFTINALYFDVTSERLLDYANGVH
DIRNRLIRLIGDPEQRYLEDPVRMLRAVRFAAKLDFEIEKHSAAPIRRLAPLLREIPSAR
LFDEVLKLFLAGRAERTFELLVEYELFAPLFPASAKALQANPDYTGKLIRQALANTDARI
RQGKPVTPAFLFAALLWPALPARVAQLQEKGMPAIPAMQEAAHELISEQCQRIAIPKRFT
LPIREIWDMQERLPRRQGKRADLLLENPRFRAGYDFLLLRESAGEETEGLGQWWTDYQEV
SDSERRNMIRDLVSQEDGSAPRKRRRGGNSGRRRRGPRKEGSGGSGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaagctgatccagaccattcgttcccccctgcgccgtccgcgcgccgtccgt
acaaccccggaagtcatcggtaacaaccagcactccctgcgccgggaccagttcagccgg
aacgccgtcaaggtcgtcgagatcctccagcgggccggctaccaggcctacgtggtcggg
ggctgcgtacgcgaccagatgctcggcatcgctcccaaggacttcgatgtcgccaccagc
gccacgccggagcaggtccgcgccgaattccgcaacgcgcggatcatcggccgccgcttc
aaactggtacacgtgcacttcggccgcgagatcatcgaggtcgccaccttccgcgcccat
catccggaaggccaggacgatggcgatagccgcgcgtccagcaacgaaagcggccgcatc
ctgcgcgacaacgtctatggcagcctggaagacgacgcccagcgccgtgacttcaccatc
aatgccctgtacttcgacgtcaccagcgagcggctgctggactacgccaatggcgttcac
gacatccgcaatcgcctgatccgcctgatcggcgatccggagcagcgttatctggaagac
ccggtgcggatgctgcgggcggtacgtttcgccgccaagctcgacttcgagatcgagaag
cacagcgccgcgccgattcgccggctggccccgctgctgcgggaaatcccttcggcgcgc
ctgttcgacgaggtgctcaagctgttcctcgccggccgggccgagcgcactttcgaactg
ctggtcgagtacgaactgttcgcgccgctgttcccggccagcgccaaggcactgcaggcc
aaccccgactacaccggcaagctgatccgccaggccctggccaataccgatgcgcgtatt
cgccagggcaagccggtaaccccggccttcctcttcgccgcgctgctctggccggccctg
ccggcgcgcgtcgcgcagttgcaggagaaaggcatgccggctatcccggcgatgcaggaa
gccgcccacgaactgatcagcgaacagtgccagcggattgccattcccaagcgtttcacc
ctgccgatccgcgagatctgggatatgcaggaacgtctgccgcgacgccagggcaagcgc
gccgacctgctcctggaaaacccgcgcttccgcgccggctacgacttcctcctgctgcgc
gaaagtgccggcgaggaaaccgaaggactcggccaatggtggaccgattaccaggaagtc
agcgacagcgagcggcgcaacatgatccgcgacctggtcagccaggaagacggcagcgcc
ccgcgcaagcgtcgccgcggcggcaacagcggccgtcggcgccgcgggccgcgcaaggaa
ggcagcggcggaagcggcgaatga
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