Pseudomonas aeruginosa PAO1-VE13: N297_3154
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Entry
N297_3154 CDS
T03097
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Pathway
paev00550
Peptidoglycan biosynthesis
paev01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N297_3154 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paev01002
]
N297_3154 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paev01011
]
N297_3154 (dacB)
Enzymes [BR:
paev01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N297_3154 (dacB)
Peptidases and inhibitors [BR:
paev01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
N297_3154 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
paev01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
N297_3154 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AGY71325
LinkDB
All DBs
Position
3410259..3411689
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AA seq
476 aa
AA seq
DB search
MFKSLRTLAFATLLPFALPTLAQVNATLPANVQKALQTNKLTGNDLSLVLIPLDGPGNPT
YYNADVSVNPASTMKLFTTYAALEMLGPTYQWKTEFYTDGQLKNGVLNGNLYLKGGGDPK
LNMEKLWLLMRDLRANGVTKVTGDLVLDRSYFNIPQLPVFNDDGGDDTKPFLVGPDSLLV
NLKSVRMVVRTDGNKVNVQMDPPLANVRIDNQVKMTAPATCPAWPKLRFSPVTQFDGTTL
LATGQIPQGCSAQTYMSLLDHPGYTAGAVRGIWQELGGSILGKDRQGSVPRNATLIAKAF
SPDLVEIIRDINKYSNNTMARQLFLSIGAQFRNSADGDDAQAAQRVVRQWLARKGITAPR
LVMENGSGLSRQERVSAREMAAMLQAAWHSPYAAEYISSLPLAGLDGTMRKRLRRTALVG
EAHVKTGTLNTVRALAGFSRDASGHNWVVVAILNSPRPWGASAILDQVLLSLHARK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtcgctgcgtactcttgccttcgccacgctcctgcctttcgcccttcccacc
ctcgcccaggtcaacgccaccctgccggccaacgtgcagaaagccctgcagaccaacaag
ctgaccggcaacgatctgtcgctggtgctgattccgctcgacggcccgggcaaccccacc
tactacaacgccgacgtatcggtgaacccggcctcgaccatgaagctgttcaccacctat
gccgccctggaaatgctcggcccgacctaccagtggaagaccgagttctacaccgacggc
cagctcaagaacggagtgctcaacggcaacctctacctcaagggcggcggcgatccgaaa
ctgaacatggagaagctctggctgctgatgcgcgacctgcgcgccaatggcgtgaccaag
gtcacaggtgacctggtactcgaccgcagctacttcaacatcccgcagttgccggtattc
aacgacgacggcggcgacgacaccaagccgttcctggtcggtccggactcgctgctggtc
aacctgaagagcgtgcgcatggtggtgcgcaccgacggcaacaaggtcaacgtgcagatg
gacccgccgctggccaacgtacgcatcgacaaccaggtgaagatgaccgcgccggccacc
tgcccggcctggccgaagctgcgcttcagcccggtgacccagttcgacggcaccaccctg
ctggccaccggacagattccccagggctgtagcgcgcagacctacatgtcgctgctcgac
caccccggctacaccgccggcgcggtgcgcggcatctggcaggagctgggcggcagcatc
ctcggcaaggaccgccagggcagcgtaccgcgcaacgccacgctgatcgccaaggccttc
tcgccagacctggtcgagatcatccgcgacatcaacaaatacagtaacaacaccatggcc
cggcagttgttcctctccatcggcgcgcagttccgcaacagtgccgacggcgacgacgcc
caggccgcgcagcgggtggtgcggcagtggctggcgcgcaagggcatcaccgcgccgcgc
ctggtgatggagaacggctcgggactgtcgcgccaggaacgggtcagcgcccgtgagatg
gcggcgatgctgcaagccgcctggcacagcccctatgcagcggagtacatctcctcgctg
ccgctggccggcctcgacggcaccatgcgcaaacgcctgcggcgcaccgcactggtcggc
gaggcgcacgtgaagaccggcaccctcaacaccgtgcgcgccctcgccggcttcagccgc
gacgccagcggccacaactgggtggtggtggcgatcctcaacagcccgcggccgtggggc
gcttcggcgatcctcgaccaggtactgctgagcctgcacgcgcggaaataa
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