Pseudomonas aeruginosa M18: PAM18_0471
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Entry
PAM18_0471 CDS
T01973
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
paf
Pseudomonas aeruginosa M18
Pathway
paf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PAM18_0471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paf03021
]
PAM18_0471
Transcription machinery [BR:
paf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PAM18_0471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Rv2175c_wHTH
HTH_24
MerR
Sigma70_r3
HTH_17
FaeA
HTH_AsnC-type
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AEO72960
LinkDB
All DBs
Position
complement(525651..526169)
Genome browser
AA seq
172 aa
AA seq
DB search
MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREP
RAFLAKVARGLMIDHFRRAALEQAYLAELALVPEAEQPSAEEQYLILEDLREIDRLLGTL
SLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcgggtgacgtcagcaacagcgaattcgtgggtagcctgtaccgggaccaccgc
ggctggctgcttgcctggctgaaccgcaacctcggctgccgccagcgcgccgaagacctc
agccaggacaccttcgttcgcctcctcggccgcccggagctgcccggcctgcgcgaaccg
cgcgcgttcctggcgaaggtggcgcgcggtctgatgatcgaccacttccgccgcgccgcc
cttgaacaggcctatctcgccgaactggcgctggttccggaagcggagcagccttcggcc
gaagagcagtacctgattctcgaggacctccgcgagatcgatcgcctgcttggcacgctg
tcgctgaaggcgcgtagcgcgtttctctatagccgcctggacggcatgccccacgcggag
atcgccgagcgtctcggagtctcggtgccgcgcgtgcgccaatacctggcccagggtctg
cgccagtgctacatcgccctctacggagagccccggtga
DBGET
integrated database retrieval system
