Pantoea vagans FDAARGOS_160: AL522_05815
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Entry
AL522_05815 CDS
T04302
Name
(GenBank) DNA-binding transcriptional regulator SoxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pagg03000
]
AL522_05815
Transcription factors [BR:
pagg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AL522_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_3
CBM9_1
Motif
Other DBs
NCBI-ProteinID:
AMG57185
LinkDB
All DBs
Position
complement(510940..511365)
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AA seq
141 aa
AA seq
DB search
MMQEEIIHSLTDWIDQNLDKSLSIDEVAAKSGYSKWHLQRMFRSVTKQTLGGYIRERRLT
LAAEALSQTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRHTMRRQAIQRPRLLSF
GCNDGITSFTQRTTGECCPVR
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagaagagatcattcattccctgacggactggattgaccagaacctcgataag
agcctgtcgatagatgaggttgcggcaaaatcaggctattcgaaatggcacctgcagcgt
atgttccgttccgtgacgaaacagacgctgggtggctatattcgtgagcgccgcctgacg
ctggccgcagaagcgctctcgcagacacagcgtccggtgtttgatatcgcgatgcaatat
ggctatgactcgcaacagaccttctcccgggtgtttcgtcgtcagttttcacagaccccg
accgcttatcgccacaccatgcgccgccaggcgattcagcgccctcgtctgctgagtttt
ggctgtaacgacggtatcaccagctttacccagcgcaccaccggcgagtgctgcccggtc
cgttaa
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