Pantoea vagans FDAARGOS_160: AL522_20025
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Entry
AL522_20025 CDS
T04302
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg00330
Arginine and proline metabolism
pagg00480
Glutathione metabolism
pagg01100
Metabolic pathways
pagg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AL522_20025
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AL522_20025
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AL522_20025
Enzymes [BR:
pagg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AL522_20025
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AMG59725
LinkDB
All DBs
Position
complement(3548913..3551066)
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AA seq
717 aa
AA seq
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MTPLKIAASAAVAPSLTLNTARDVVTLDNTDFTDVAAVVVSLADTRSGMLALLRHTGFNL
PVFVANAFEEEVMHLPGVSGELNGEPQEWIALEAAAQAYEAALLPPFFGTLTRYVDMQNS
TFACPGHQGGAFFKKHPAGKQFYDFYGENVFRSDMCNADVKLGDLLIHEGSAKDAQKYAA
KVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEA
ARNPFGFIGGIDAHCFDEAYLREQIAVVAPQRAEEARPFRLAIIQLGTYDGTVYNARQVV
DRIGHLCDYILFDSAWLGYEQFMPLMEGCSPLTLELNENDPGIFVTQSVHKQLAGFSQTS
QIHKKDNHIRGQRRFCPHKRLNNAFMLHASTSPFYPLFAALDINARMHQGEAGRRMWDEC
VTLGIEARKAILARCEMILPFVPEIVDGQRWQDAPVETIASDLRYFSFEPQAKWHGFAGY
ARDQYRVDPCKLLLTTAGIDAASGEYSDFGIPATILANYLRENGIVPEKCDLNSILFLLT
PAESPEKMANLVAMLAQFEQHVKEDAPLAEVLPTIYRKNAQRYAGYTLRRLCQEMHDLYV
SHNVKDLQRLMFRAAEFPPVSVNPQDAHQAYIRGEVELVPIAEAAGRVAAEGALPYPPGV
LCVVPGEVWGGAVQRYFLALEEGLNLLPGFSPELQGVYTEEDEQGRKYLVANMMVGR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgactccactgaaaattgctgccagcgccgctgtcgcgcccagcctgaccctgaatacc
gcgcgtgacgtagtgacgctggataataccgactttacggatgtggcggcggttgtcgtc
tcgctggcggatacccgcagcggcatgctggcgctgctgcgtcacaccggttttaatctg
ccggtgtttgtcgcgaatgcgtttgaagaagaggtgatgcatctgcctggcgtcagcggg
gagctgaatggcgagccgcaggagtggattgcactggaagcggctgcacaggcgtatgaa
gcggcgctgctgccacccttcttcgggacgctgacccgctatgtcgatatgcagaacagc
acatttgcctgccccggacatcagggcggcgcgttctttaaaaagcatccggcgggtaaa
cagttttatgacttctatggcgagaatgttttccgctctgacatgtgcaacgccgacgtc
aaactgggcgatctgctgatccacgaaggctcggctaaagatgcgcagaagtatgcggca
aaggtgtttaacgccgataaaacctactttgtgctcaacggcacctcgagcgctaataaa
gtggtgaccaatgcgctgctgacccgcggcgatctggtgctgtttgaccgcaacaatcac
aagtcgaatcatcatggtgcgctgattcaggcgggcgcgaccccggtttatcttgaagca
gcacgtaaccccttcggctttattggcggtattgacgcacactgctttgatgaggcttat
ctgcgtgagcagatcgcggtcgtcgcccctcagcgcgcagaagaggcgcggcctttccgt
ctggcgattatccagctcggcacctacgatggcaccgtctacaacgcccgccaggtggtg
gatcgcatcggccatctgtgtgattacatcctgtttgattccgcgtggctcggttatgag
cagttcatgcccctgatggaaggctgttcgccgctgactctggaactgaatgaaaacgat
cctggcatttttgtcacgcagtccgtgcataagcagctggccggtttttcgcagacttcg
cagatccacaaaaaagataatcacattcgcggacagcggcgcttctgcccacacaagcgt
ctgaataacgcctttatgctgcacgcttccaccagtccgttttatccgctgtttgccgcg
ctggatatcaacgccagaatgcatcagggcgaagcgggccgtcgcatgtgggatgagtgc
gttacgctgggcattgaggcgcgtaaagcgatcctggctcgctgcgaaatgatcctgcct
tttgtgccggaaattgttgatggacagcgctggcaggatgcgcctgttgagacgatcgcc
agcgatctgcgttacttcagctttgaaccgcaggcgaagtggcacggttttgcgggttac
gcgcgcgatcaatatcgggtcgatccctgcaagctgctgctgaccacggcagggatcgat
gcggccagcggggaatacagtgatttcgggatcccggcaaccattctggctaactacctg
cgtgagaacggcatcgtgccggagaaatgcgatctcaactcgatcctgtttctgctgacc
ccggcagagagcccggagaagatggcgaatctggtggcgatgctggcgcagttcgagcag
cacgtcaaagaggatgcgccactggccgaagtgctgccgacaatttaccgcaaaaacgcg
caacgttatgccggctataccctgcgtcgcctctgtcaggagatgcacgacctttacgtc
agtcacaacgtgaaggatctgcagcgcctgatgttccgcgccgcggagttcccgccggtg
agtgtgaatccgcaggatgcgcatcaggcttatattcgcggcgaagtggagctggttccg
atcgccgaggccgctggccgcgtcgctgctgaaggcgcgctgccttatccaccgggcgtg
ctgtgcgtcgtgccaggcgaagtctggggcggcgcggtgcagcgttacttcctggcgctg
gaggaggggcttaatctgctgccgggcttctcgccggagctgcagggcgtttacaccgaa
gaggatgagcagggacgtaagtatctggtggccaatatgatggtggggcgctga
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