Planktothrix agardhii: NIES204_12100
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Entry
NIES204_12100 CDS
T05658
Symbol
cpcF
Name
(GenBank) phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00196
Photosynthesis - antenna proteins
pagh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
NIES204_12100 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pagh00194
]
NIES204_12100 (cpcF)
Enzymes [BR:
pagh01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
NIES204_12100 (cpcF)
Photosynthesis proteins [BR:
pagh00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
NIES204_12100 (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
Motif
Other DBs
NCBI-ProteinID:
BBD53926
UniProt:
A0A2Z6CBS0
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All DBs
Position
complement(1465258..1465890)
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AA seq
210 aa
AA seq
DB search
MTVQILIQSVEKADSAASLFKAVSALAQANSVEAIPTLITVLGYNNPGAAVAAVDGLTQL
GEPAVIPLLEQLDGYNYGARAWAIRALSGIGDPRGLEVLLESAGSDFALSVRRAATRGLG
NIHWDKLPFEQLADAQFETFKILQKTVEDPEWIVRYAGVFGLEGLAIAIQKTQPEWLNKI
QEQLQQLANIDEVLAVRARAKWAIQKIKNY
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgactgtacaaatattaattcaatctgttgaaaaagctgattctgctgcctctttattt
aaagctgtttctgccttagctcaagctaattctgttgaagcaattccgacattaattacc
gttttaggctataataatcctggggctgcggtggctgcggtggatggattaactcagttg
ggtgaacctgcggttattcccttattagaacaattggatggttataattatggggcaagg
gcttgggctattcgtgccttatcaggtattggtgatcctcgtggtttagaggttttatta
gaatccgccgggagtgattttgctttaagtgttcgtcgggcagctaccagaggattaggg
aatattcactgggacaaattaccttttgaacaacttgctgatgctcaatttgaaactttt
aaaatattacaaaaaaccgtagaagatcccgaatggattgttagatatgcgggtgttttt
gggttagagggtttagcaatagctattcaaaaaactcaaccagaatggttgaataaaatt
caagaacagttacaacaattagcaaatattgatgaagttctggcagttagagctagggca
aaatgggcaattcaaaaaattaagaattattaa
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