KEGG   Paenibacillus sp. IHB B 3084: ASL14_10145Help
Entry
ASL14_10145       CDS       T05348                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
paih  Paenibacillus sp. IHB B 3084
Pathway
paih03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:paih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    ASL14_10145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paih03400]
    ASL14_10145
Enzymes [BR:paih01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ASL14_10145
DNA repair and recombination proteins [BR:paih03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ASL14_10145
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase
Motif
Other DBs
NCBI-ProteinID: ALP39028
UniProt: A0A0S2SBC6
LinkDB All DBs
Position
2193698..2194645
Genome map
AA seq 315 aa AA seqDB search
MKPVIPFEPVQSEQIPTEGLWRYEIKWDGTRILTYHNQDSTRLFNRKQHERTLLYPELAS
FSSYCQAESIILDGEMIALGADGKPSFHEIMRRDLIRRTDRIQAAYEAVPATYMLFDIVY
LNGEWVHRKPLAERLELLHQVILPNERVQLAPAHPDGQALFQVMRSEGMEGMVCKRLDSP
YTFGGKDGRWVKVKNYGDSIAVIGGYTLNGGVINAVLLGLYDKQGGLRYIGHAGTGKLTR
EDWRQLTERLRPHTISARPFVNEPERHRDAIWVQPMYTAKVQYSEWRWQEGRTLRQPSIQ
AFVNQDAGQCIGPWS
NT seq 948 nt NT seq  +upstreamnt  +downstreamnt
atgaaacccgttatcccgtttgaacctgtgcaaagtgaacaaatccctacggagggcctg
tggcggtacgaaataaaatgggatggcacgagaattttgacatatcacaatcaggatagc
acacgtctgtttaaccggaagcagcatgaacgaacgcttttatatcctgaactcgcttca
ttttcctcatattgccaggctgaatcgataattctggacggggaaatgatcgcactggga
gccgatgggaagccctcgttccatgagattatgcgacgcgacctgattcgtcgaacagat
cggattcaagcggcttatgaagctgtgcctgctacgtacatgctgtttgatatcgtgtat
ctgaatggagaatgggttcaccgtaaaccgctagcagaaaggctcgaattattgcatcag
gtcatcctgccgaatgaacgggttcaactggcgcctgcacatcctgatggacaagctctg
tttcaggtgatgcgcagcgaagggatggaaggtatggtatgcaaacgtttggatagtcct
tacacatttggcgggaaggatgggcgatgggtcaaggtcaagaattacggcgatagcatc
gctgttattggaggctacactttaaacggaggcgtcatcaatgctgtgttgctggggctg
tacgacaagcaaggagggctgcgctacattggacatgcaggcacagggaagcttacgcga
gaggactggcgtcagcttacggagcgactgagaccgcataccatttcagcgcggcctttt
gtcaatgagccggaacgtcatcgggatgcaatatgggtacaacctatgtataccgccaag
gttcaatacagtgagtggcgatggcaggaagggcgtaccctccgtcagccctctatacag
gcttttgtaaatcaggacgcagggcagtgcattggaccttggtcatga

DBGET integrated database retrieval system