Paenibacillus albus: EJC50_11670
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Entry
EJC50_11670 CDS
T06567
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
palb
Paenibacillus albus
Pathway
palb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJC50_11670 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palb03019
]
EJC50_11670 (recQ)
03400 DNA repair and recombination proteins [BR:
palb03400
]
EJC50_11670 (recQ)
Enzymes [BR:
palb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJC50_11670 (recQ)
Messenger RNA biogenesis [BR:
palb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJC50_11670 (recQ)
DNA repair and recombination proteins [BR:
palb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJC50_11670 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
HTH_29
Sigma70_r4_2
HTH_38
GerE
HTH_35
Helicase_Sgs1
DUF4690
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AZN43661
UniProt:
A0A3Q8X9L3
LinkDB
All DBs
Position
2602699..2604945
Genome browser
AA seq
748 aa
AA seq
DB search
MHEEALRTLKQVYGYDSFRKGQSDIIAGVLEGKDTLAILPTGGGKSICYQLPALLLPGTT
IVVSPLISLMKDQVDSLNRLGVSAAYLNSSLSAESYREVVRQTAQGVYKLLYVAPERLDS
TMFDSLSSQMHIPLIAIDEAHCVSQWGHDFRPSYRQLAGWIGRLENRPPVAAFTATATPE
VSEDIAAMLGLRQPNIFVTGFARTNLTLSVVTGTDKRKFLRDFVKQRPDQSGIVYTATRK
EAEEVSEDLMKLGIATGKYHGGLNDEERGDAQEKFRFDEYRVMVATNAFGMGIDKPNVRY
VIHWQMPGDVESYYQEAGRAGRDGEESDCVLLFEPQDVQVQRFLIDRSTTDQERKTIQLN
KLYTMMHYSRSEKCLLQYIVRYFGEADVPECGKCSNCLDQSAMIDTTEDARKALSCVGRM
KGRFGISLAAKVLKGSREKRILEFGLDRLSTYGLMRSWAEKEITDLLYYLVAEGYLRISE
GEYPTVSLTAEALPVLEGKVSVHRRQSAAAKRRETAGTNVSAANTPLFEALREWRRVTAA
RESVPPFMLFFDAALREIAGRQPITTEQLLGVKGVGEAKARKYGSDVIAIVRDFKEGTTA
LGAASLAGGDSPLQTTESAQASRAAAVPKTQVQVSQEDAAELAELESLPSHMQTLTLIGR
GKSLADIAAIRGMSRMTIENHLLRCAQEGEELDWTMFIPEQYESLIVETILQIGSDKLKP
IKEALPEDVDYFAIKAVMVKHQLSPSYE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atacatgaagaagcgctgcgtacgctaaagcaggtgtatggctatgacagcttccgtaaa
ggtcagagcgacatcattgcaggcgtgctggaagggaaggatacgctcgccattctgcca
acaggcggtggtaagtccatctgttatcagcttcccgcactgctgctgcctggtacgaca
atcgtcgtatcgccgctaatctcgcttatgaaagaccaggtggattcgcttaatcggctt
ggtgtatcggctgcctatcttaacagctcgcttagtgcagaatcgtaccgtgaagtggtg
cgtcagactgcgcaaggcgtgtacaagctgttatatgtcgcgccggagcggctcgacagc
acgatgttcgactccttatcgagtcaaatgcatatcccgctcattgcgattgatgaagcg
cactgcgtatcgcaatggggccatgatttccgcccgagctaccggcagctggcaggctgg
atcggaagactcgagaaccgtccgcctgtagcggcatttacggcaacggcgacacctgag
gtttccgaggatattgcggcaatgctggggctgcgacaaccgaatattttcgtaacgggg
tttgcgcgtacgaatcttacattatcggtcgtgacagggactgataaaaggaagtttctg
cgtgacttcgtaaagcagcgtcctgaccaatccgggatcgtgtataccgcgactcgcaag
gaagccgaagaagtgagcgaggatctgatgaagcttggcatcgcaacaggcaagtaccac
ggcggcttgaacgatgaggagcgaggggacgcgcaggaaaagttccggttcgacgaatac
cgggtcatggtggcgacgaatgcgttcggcatgggcatcgataagcccaacgtacgttat
gtcattcactggcagatgccaggtgatgtggaatcgtactaccaggaggccggacgtgct
gggcgagacggagaagagagtgattgcgtcctgctgtttgagcctcaggatgtgcaggtg
cagcggtttctgatcgaccgcagtacgacagatcaagagcgtaagacgattcagctgaac
aagctgtacacgatgatgcattacagccggtcggagaagtgtctgctgcaatatatcgtg
cggtatttcggtgaagcggatgtgccggaatgcggcaaatgcagcaactgtctcgatcag
agcgcgatgattgacacgacggaggatgctcgcaaagcgttatcctgcgtcggtcggatg
aagggccgcttcggcatatcgttggccgcgaaagtgctcaagggctcgcgagagaagcga
attctcgagttcgggctcgataggctatcgacttatggtctcatgcgcagctgggcggag
aaggagattaccgacctgctctattatcttgtcgcggaaggttatctacggattagtgaa
ggggaatatccaacggtgtcactgacagcggaggcgctgcccgtattagaaggcaaggtg
agcgtacaccgccggcagagcgctgcagccaagcgaagagaaacagcgggaacgaatgta
tcagccgcgaatacgccgctgttcgaagcgctgcgagaatggcgccgcgtaacggccgca
agagagagcgtcccgccgttcatgctgttcttcgatgcggcgctgcgtgaaattgccggc
aggcagccgattacgaccgagcagctgcttggtgtgaaaggtgtcggcgaggcgaaggcg
cgcaaatatggcagtgatgtcatagcaattgtacgtgatttcaaagaaggtacgacggct
ttaggagcagcttcattggcgggtggggactcgccgctgcagacaacagaatccgcacaa
gcgagtagagcggcggctgtaccgaagacgcaggtgcaagttagtcaggaggatgccgca
gagctggcggagcttgagagcctgccgagtcatatgcagacactcaccttgattggcaga
ggcaagtcgcttgctgatattgcagccatacgcggcatgagtcgtatgacgatcgagaac
catctgctgcgctgcgctcaggaaggcgaggagttagactggaccatgttcatccccgag
cagtatgagtcgctcatcgtggagacgattctgcagatcggaagcgataagctgaagccg
atcaaagaggcgcttccggaggatgtcgattattttgctataaaggcggttatggttaag
catcagttgtccccttcatacgaataa
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