Pteropus alecto (black flying fox): 102880357
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Entry
102880357 CDS
T02993
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102880357 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pale03021
]
102880357 (POLR1A)
Enzymes [BR:
pale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102880357 (POLR1A)
Transcription machinery [BR:
pale03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102880357 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
102880357
NCBI-ProteinID:
XP_024906656
LinkDB
All DBs
Position
Unknown
AA seq
1721 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
REVCSTCVQDFSNCAGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENSDPTAFEIQEELERYTTKIVQNNLLGSQGAH
VKNVCESKSNLITYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKAGQKDT
EPLGIEEAQMGKRGYLTPTSARDHLSALWKNEGFFLNFLFSGLEDVGMESSFSPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEEKDSSVTMDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQT
LEKKDGLFRKHMMGKRVDYAARSVICPDLYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGTPKPQGTKIVCR
HVKNGDILLLNRQPTLHKPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEASVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTTRGCFFNREQYMQLVYRG
LTDKVGRVKFFPPAIRKPFPLWTGKQVVSTLLINIIPEEHIPLNLSGKAKISGKAWVKES
PRPVPGFNPNSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGQTSGKVLTC
LARLFTAYLQLYRGFTLGMEDILVTPKADGKRHRIIGESTHCGPRAVRAALNLPETASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQNKHS
NTLLRKGAFLSYSQKVREAVKALNLQDANQHGRSPGTYQMLRMWGELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKRQLTRVCLGEVLQKIDVQESFCMGEKQNKSRMYQLRFH
FLPHAYYQQEKCLKPKDILHFMETRFFKILMESIRKKNSKASAFRSVNTRRATQRDLDNA
GESERNQGEQEGDEEEEGHIVDAEAEEGDADASDIKRKEKQEEEVDYESEEEGEKEGEEN
DDEEDVQEEGNVCGEGAHRAQEQDEEVGSSPEENSPPAPAPRQHRKPTCSPEPQGAEAVE
HRVQAVCESHPFIEDYQYDSEESLWCQVTVKLPLMKVNFDMSSLVVSLAHSTVIYATKGI
TRCLLNETTTNKNEKELILNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALR
VIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKQLNRFGIRSNSSPLQQMTFETSFQ
FLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgttaggctcaaagaacatgccctggcggcggcttcagggcatttccttcgggatgtat
tcggctgaggagctcaagaaattgagtgttaaatctattacgaaccctcggtacctggac
agcctggggaacccgtcggtgaacggcttgtatgatttagctctgggccctgcagattcc
agagaggtgtgctctacctgcgtgcaggacttcagcaactgcgctggccacctgggccat
attgagctccccctcacagtgtacaaccctctcctcttcgataagctctacctgttgctc
cggggctcctgtttaaactgccacatgctgacttgcccccgggctgtgattcacctccta
ctctgccagctgcgagtgctggaagttggagcgcttcaagcagtatatgagctggagaga
attctgaacaggtttctggaagaaaactctgaccctactgcctttgaaattcaggaagag
ttagaacgatatacaaccaaaattgtacagaacaacctcctgggatcccagggtgcacat
gtgaaaaatgtctgtgagagcaagagcaatctcattacttacttctggaaggcacatatg
actgctaagcgatgtccccactgcaagactgggcggtcagttgtccgaaaggagcataac
agcaaactgacaatcacgtatccagccatggtgcacaagaaggctggccagaaggacaca
gagcccctaggaattgaggaagctcagatgggaaaacgaggctacctaacacccaccagc
gcacgagaccatcttagtgccctctggaagaatgaaggattctttctgaatttccttttt
tcgggactggaagatgttggcatggagtctagtttcagccccagtatgttctttctggat
ttcttagtggtgcctccctcaagatatcgccctgtcaatcgcctgggggaccagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggacatggttctgatccgaaag
cttctggcgttgatggctcaagaacaggagctgccatgtgaggtggcagcacctgccaaa
gatgaggaaaaagactcttcagttactatggaccgatcctttttgagtatgcttccaggc
cagtccctcacagacaaactatacaacatttggattcgccttcagagccacgtcaatatt
gtatttgatagcgagatggacaaattaatgatggaaaagtaccctggcattagacagacc
ttagagaagaaggacggcttgttccgaaagcacatgatggggaagcgagtagactatgca
gctcgctcggtcatctgcccagacctgtacatcaacaccaacgagattggaatccccatg
gtttttgccacaaagctgacctaccctcagccagttaccccctggaacgttcaggaactg
aggcaagcagtcatcaacggccccaatgtgcacccaggagcttccatggtcatcaacgag
gatggcagtcgcacagccttgagtgccgtggacctgacccagcgggaggccgtagccaaa
cagcttctgacaccagccacggggacgccaaagccccaggggacaaagattgtgtgccgg
catgtgaaaaacggggacattctcctcctgaaccgacagcccaccctgcacaaaccctcc
atccaggcacatcacgcccgcatccttcccgaagagaaagtcctacggctccactatgcc
aactgcaaagcctacaatgctgactttgatggagacgagatgaatgcccactttccccag
agtgagctgggccgggccgaagcctctgtcctggcctgcacggatcagcaataccttgtt
cccaaggatggccagccattggcaggcttgatccaggatcacatggtttcaggtgcaaac
atgaccactcgaggttgctttttcaaccgggagcagtacatgcaactggtataccgagga
cttacggacaaagtggggcgcgtgaagttctttcctcccgccatccgaaagccttttccg
ctatggacgggaaagcaggtcgtgtcgacgctgctcataaacataatcccagaggagcac
atcccattgaatttatcgggcaaggcgaagatcagcgggaaagcctgggtgaaagagtct
cctcgacctgttcccggctttaaccccaactccatgtgcgagtcccaggtgatcatcagg
gaaggggagctgctctgcggagtgctggacaaagcgcactatgggagctctgcctacggc
ctggtccactgctgctatgagatctacggagggcagaccagtggcaaggttctcacctgc
ctggcccgacttttcactgcctacctgcagctatacagaggcttcaccttgggcatggaa
gacatcttggttacacccaaggcagacggcaagagacacaggatcatcggcgagtccacc
cactgtgggccccgggctgtcagggctgccttaaacctgccagaaactgcatcatgtgat
gaggtccgagggaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
atcgatctaaagttcaaggaggaagtgaaccattacagtaatgagattaacaaggcatgc
atgccttttggcctgcacagacagttcccagagaacaacctgcagatgatggtgcagtct
ggagccaaaggttcaactgtgaacaccatgcagatttcatgcctgctgggccagattgaa
ttggaaggtcggagacccccactgatggcgtctggcaagtcactgccctgctttgagcct
tatgaattcacccccagggctggtggttttgtcactggcagattcctcactggcattaag
cctcctgagttcttctttcactgcatggcagggcgagagggtctggtcgacaccgctgtg
aaaaccagccgctctggctacctccaaaggtgcatcatcaagcacctggaggggctggtt
gtccagtatgacctgacagtccgcgacagtgacggcagcgtggtacagttcctgtatgga
gaggacggtctggacatccccaagacacaattcctacagcccaagcagtttcccttcctc
gccagcaactacgaggtaataatgaaatcgaagcatctccatgaagttttatccagagca
gatccccaaaaagctctccgccacttcagagccatcaaaaaatggcagaacaagcattct
aacaccttgctgagaaaaggcgccttcttgagttattcccagaaagttcgggaagctgtg
aaagccttgaacctccaggatgccaaccagcatggccgcagccccgggacttaccagatg
ctgaggatgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcggct
ccttgtcctgaccccagtctgtctgtctggcgcccggacatctactttgcatcagtgtca
gaaacatttgaaaaaaagatggatgactacagttgcgagtgggcatcccaagcagagaag
agttatgagaaatcagagctttcccttgacaggttgaggaccctgctgcagctgaagtgg
cagcgctcactgtgcgacccgggcgaggcggtgggcctgctggccgcccagagcatcggg
gaaccctcgacacagatgactctgaacaccttccacttcgctggcagaggcgagatgaat
gtcactctgggcattccgaggttgagggagattctcatggtggccagcgccaacatcaag
acacccatgatgagtgtgcccgtgctcaacaccaaaaaagcactgaagagagtgaaaagc
ctgaagaggcagctcaccagagtgtgcttaggggaggtgttgcagaaaattgatgtccag
gagtccttctgtatgggagaaaagcagaacaagtctcggatgtaccagctgcggtttcat
ttcctgccacatgcatattaccagcaagagaagtgcctgaaacctaaggacatcctgcac
ttcatggaaacaagattctttaaaattcttatggaatccatcagaaagaagaatagcaaa
gcatcagctttcagaagcgtgaacactcgaagagctacccagcgggacctagacaatgct
ggagagtcagagaggaatcagggtgagcaggaaggtgatgaggaagaggaggggcacatc
gtggatgccgaagctgaagagggagatgctgatgcctctgacatcaaacgcaaggagaag
caagaggaggaggttgattatgagagcgaggaagagggagagaaggagggagaggagaat
gacgacgaggaggatgtgcaggaggaaggaaacgtttgtggggagggcgcccacagggcc
caggagcaggacgaagaagtgggctcaagccccgaggagaactcgccccctgctccagcc
ccgagacagcaccggaaacccacctgcagcccagagccccagggagctgaggccgtggaa
caccgggtgcaggccgtgtgtgaatcccacccgttcatagaggactaccagtatgactcg
gaggagagcctgtggtgccaggtgacagtgaagctccctctaatgaaggttaactttgat
atgagctccctggtagtgtccttggcccatagcaccgtcatctatgcgaccaagggcatc
acaaggtgcctcctgaatgaaaccaccaccaacaagaacgagaaggagcttatcttaaac
acagaaggaatcaacctgccagagcttttcaagtatgctgaggttctggatttgcgccgc
ctgtattccaatgacatccacgcgatggccagcacctatggcatcgaggctgcactgcgg
gttatcgagaaggagatcaaggacgtgtttgccgtgtacggcattgcagtcgatccccgc
catctctccctggtcgcggactatatgtgcttcgaaggtgtttacaagcaactgaaccgc
tttgggatccggtcaaattcgtcccctctacaacagatgacgtttgaaaccagcttccag
ttcctgaaacaagccaccatgatgggatcccatgacgagctgaggtccccttccgcctgc
cttgtggttggaaaggtcgtcaagggtggaacgggcctattcgaactcaagcagcccctg
agatag
DBGET
integrated database retrieval system
