KEGG   Pteropus alecto (black flying fox): 102888401Help
Entry
102888401         CDS       T02993                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    102888401 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pale03400]
    102888401 (LIG4)
Enzymes [BR:pale01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102888401 (LIG4)
DNA repair and recombination proteins [BR:pale03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     102888401 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_IV BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme APG17
Motif
Other DBs
NCBI-GeneID: 102888401
NCBI-ProteinID: XP_006909433
UniProt: L5KU26
LinkDB All DBs
Position
Unknown
AA seq 911 aa AA seqDB search
MAASPTSQTVASHVPFADLCSTLERIQRSKGRAEKIRYFREFLDSWRKFHDALHKNQKNV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLSIQQVNDILDSVASNNSAKRKDLIKKSLLHFITQSSA
LEQKWLIRMIIKDLRLGFSEQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDIYEYFSRNGYKYTE
QFGASPQEGSLTPFVHNAFKTDIQVCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILTSIFTPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVIIVGGYWGKGSRGGMM
SHFLCAVTEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFHKKAPPRSIVC
GTEKPEVYIEPCNSVIVQIKATEIVPSDMYKTGCTLRFPRIEKIREDKEWRECMTLDDLE
QLRGKASGKLASKHFYVGGDDEPQEKKRKAAPKTKKVIGIIEHLKAPNLSNINKVSSIFE
DVEFCVMSGTESCPKLDLENRIAELGGYIVQNPGPDTYCIIAGSENIRVKNIISSNKHDV
VKPEWLLECFNTKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFIDTDLNQLKEVFSG
IKNSSEQTPKEMASVIADLEYRYSWECSPLSMFRHYTIYLDLYTVINDLSTEIEGTRLAF
TALELRFHGAKVVSCLAEGVSHVIVGEDHSRVVDFKAFRRTLKIKFKILQDGWVTDSIDK
CELQEEKQYLV
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcaccaacttcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagaaaaaattagatacttcagg
gaatttttagattcttggagaaaatttcatgatgcccttcataagaaccaaaaaaatgtc
acagactctttttacccagcaatgagacttattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgctaagctttatattgaattgctcaatttacct
agagaaggaaaagatgctcttaaacttttaaattacagaacacctactggaactcgtgga
gatgctggagactttgccatgattgcatactttgtattgaaaccaagatgtttacagaaa
ggaagtttaagcatacagcaagtaaatgacattttagactcagttgccagcaataattct
gccaaaagaaaagacctaataaagaagagtcttcttcactttataactcagagttcagca
cttgaacaaaagtggcttatacggatgataataaaggacttaagacttggttttagtgag
caaactgtattttctgtttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaagtctgtagacaactgcatgatccttcaataggactcagtgatatttctatc
actttattctctgcctttaaaccaatgctagctgcaatagcagatattgaacggattgag
aaggacatgaaaaaccagagtttctacatcgaaaccaagctagatggtgagcgaatgcaa
atgcataaagatggggatatatacgaatacttctcccgaaatggatataaatatacagaa
cagtttggtgcttctccacaggaaggttcccttacaccatttgttcataacgcattcaaa
acagatatacaagtctgtatccttgatggtgagatgatggcctataatcctaatacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggttgaagattctgatctg
caaacttgttactgtgtttttgatgtattgatggtcaataataaaaagctaggacatgag
accctgagaaagaggtatgaaattcttactagtatttttacaccaataccaggtagaata
gaaatagtacagaaaacacaggctcatactaagaaagaagtaattgatgctctgaatgaa
gcaatagataagagagaagagggaatcatggtaaaacatcctctatccatttataagccg
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtaagtggactgatggat
gaactggatgtcataattgtcgggggctattggggtaaaggttcacggggtggaatgatg
tctcattttttgtgtgctgtaacagagaagcctccttctggtgaaaaaccatcagtgttt
catactctctgtcgtgttggctcaggttacaccatgaaagaactgtatgatctgggcttg
aaattagccaaatattggaagccttttcataaaaaagctccaccacgtagcattgtatgt
ggaacagagaagccggaagtgtacattgaaccttgtaattctgtcattgttcagattaaa
gcgacagagattgttcccagtgatatgtataaaactggctgtactttgcgttttcctcga
attgaaaagataagagaagacaaagagtggcgtgaatgtatgactctggatgacttagaa
caacttcgagggaaagcgtctggaaagcttgcatctaaacacttttacgtaggtggcgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagactaagaaagttattggaata
atcgaacatttaaaagcacctaacctttctaacataaacaaagtttccagtatatttgaa
gatgtagagttttgtgttatgagtggaactgagagctgtccaaagcttgatctggagaac
agaattgcagaacttggtggttatatagtacaaaacccaggcccagacacatactgtatt
attgcagggtctgagaacattagagtgaaaaacataatttcttcaaataaacatgatgtt
gtcaagcctgagtggctgttagaatgttttaacaccaaaagctgtgtgccatggcagcct
cgctttatgatccatatgtgcccatcaacaaaacaacattttgcccgtgaatatgattgt
tatggtgatagttattttattgatacagatttgaaccaactgaaggaagtattctcagga
attaaaaattctagtgaacagactcctaaagaaatggcttctgtgattgctgatttagaa
tatcgatattcctgggagtgctctcccctcagtatgtttcgacactacaccatttattta
gacttgtatactgttattaatgacctgagtaccgaaattgagggaacaagattagctttt
acagccttagagcttcgatttcatggagcaaaagttgtttcttgtttagctgagggagtg
tctcatgtaatcgttggggaggatcatagtcgtgttgtagattttaaagctttccgaaga
actcttaagataaagtttaaaattctgcaagatggttgggtaactgattcaatagacaaa
tgtgagttacaggaggaaaaacaatatttggtttaa

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