Pantoea alhagi: B1H58_11125
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Entry
B1H58_11125 CDS
T05014
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
palh
Pantoea alhagi
Pathway
palh03410
Base excision repair
palh03430
Mismatch repair
palh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1H58_11125
03430 Mismatch repair
B1H58_11125
03440 Homologous recombination
B1H58_11125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palh03400
]
B1H58_11125
DNA repair and recombination proteins [BR:
palh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B1H58_11125
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1H58_11125
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B1H58_11125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
ARJ42524
UniProt:
A0A1W6B620
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All DBs
Position
2367116..2368846
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AA seq
576 aa
AA seq
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MNKPTQLRRREAANNAALPADLHPLLRRLYAQRGVIDERALERGAKFLHPWQGLSGMDRA
VALLHQALRDEKQIMIVGDFDADGATSTALTVLALRSMGGRNVQYLVPNRFDDGYGLSPE
VVEQAAARGAELILTVDNGISSHAGVTCAHQKGIPVLVTDHHLPGETLPAAEAIVNPNLT
DSTFPSKALAGVGVAFYLMLALRAHLREQGWFDNGLSVPNLAELLDLVALGTVADVVPLD
ANNRILVWQGMSRIRAGKCRPGIRALLEIANRDARQLAASDLGFALGPRLNAAGRLDDMS
VGVALLLTEDLAQARMLASELDALNQTRKEIEQGMQAEALTLCNQLERSSETLPLGLAFY
HPEWHQGVVGILASRLKERFHRPVIAFAPAGDGTLKGSGRSIAGLHLRDALERLDTLHPG
LILKFGGHAMAAGLSLEEAKFGQFSALFSELVGDWLDAEALQGMIWSDGELMAQELTLPT
AEMLRDAGPWGQAFPEPVFDGKFKLLQQRLVGERHLKVMIEPLGGGPLLDGIAFNVDTRL
WPDASVRHVELAYKLDVNEYRGNRSVQLLIEHIWPL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaacccacgcaactccgccgtcgtgaggcggcaaacaatgcggcgctgccagcg
gatcttcacccgctgctgcgccgtctctatgcccagcgaggcgtaatcgatgagcgcgcc
ctggagcgcggcgcaaagtttctgcatccgtggcagggcctaagcggtatggatcgggcg
gttgccttgctgcatcaggcgctgcgcgatgagaaacagattatgatcgtcggcgatttt
gatgccgacggcgcgaccagcaccgcgcttaccgtactggcgctacgcagcatgggcggc
cggaatgtgcaatatctggtgcctaaccgctttgatgatggctatggcctgagtccggaa
gtggtagagcaggcggcagcgcgcggcgcggagttaattctgacggtcgataacggtatt
tcctcacatgcgggcgtgacctgcgcgcatcagaaagggatcccggtgctggtcaccgat
caccatctgccgggcgagacgctgcctgcggcagaagcgatcgttaatcctaacctgacc
gacagtacttttccttcaaaggcactggccggagttggcgtcgcgttttatttgatgctg
gcgctgcgggcgcatttgcgcgagcagggctggttcgacaatgggctgagcgttcctaac
ctggcggagctgctggatttggtggcgttaggcacggtggcagacgtggtgccgctggat
gccaataaccgcattctggtctggcagggcatgagccgcatccgtgcaggcaagtgtcgt
ccggggatccgcgcgctgctggaaatcgccaatcgcgatgcgcgccagctggccgccagc
gatctaggctttgcgctggggccgcgtttgaatgcggcgggtcgtctggatgatatgtcg
gtcggcgtggcgctgttgctgacggaagatttagcgcaggcgcgcatgctggccagcgaa
ctggacgccttaaaccaaacgcgtaaagagatcgagcaggggatgcaggctgaagcgttg
acgctctgtaatcagctggagcgtagtagcgagacgttgcctttagggctggcattttat
catcctgaatggcatcagggcgtggttggcattctggcttcgcgcctgaaagagcgcttt
catcgtccggtaatcgcctttgcgccagcgggcgacggcactctgaaaggctctggtcgt
tcaatcgccgggttgcatttgcgtgatgcgctggagcggctggatacgctgcatcccggt
ttgattctgaagttcggcggccatgcgatggctgccgggttgtcgctggaagaggcgaag
ttcgggcagttcagcgcgctgtttagcgagctggtgggcgactggctggatgcagaagcc
ttacagggcatgatctggtccgacggcgagttgatggcacaggagctgaccttacccacc
gcagagatgctgcgcgatgccggtccctggggacaggcgtttccggagccggtattcgat
ggcaaattcaagctattacagcagcggctggtaggcgaacgtcatctgaaggtaatgatt
gagccgttaggcggtggcccgttactggacggtatcgcgtttaacgtggatacgcgcctg
tggcctgacgccagcgtgcggcacgtagagctggcctataagctggatgtgaacgagtat
cgcggcaaccgcagcgtacaactgctaatcgagcatatctggccgctgtaa
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