Pseudomonas alkylphenolica: PSAKL28_35650
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Entry
PSAKL28_35650 CDS
T03238
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palk03032
]
PSAKL28_35650
03036 Chromosome and associated proteins [BR:
palk03036
]
PSAKL28_35650
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_35650
DNA replication proteins [BR:
palk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSAKL28_35650
Chromosome and associated proteins [BR:
palk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PSAKL28_35650
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PSAKL28_35650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AIL62717
UniProt:
A0A077FBG1
LinkDB
All DBs
Position
complement(3902093..3902365)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARTG
RNPQTGKTLEIPAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgacgctatcgccgcatctgctgacatcccgaaagctgta
gctggccgtgcgctggacgcagtaatcgaatccgtcaccggcgccctgaaggcaggtgac
tccgtagtactggtaggtttcggtaccttctccgtcaccgatcgcccagctcgcaccggc
cgcaacccgcaaaccggcaagactctggaaatccctgctgccaagaagccaggcttcaag
gctggcaaggcactgaaagaagccgtcaactaa
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integrated database retrieval system
