Pseudomonas alkylphenolica: PSAKL28_40400
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Entry
PSAKL28_40400 CDS
T03238
Name
(GenBank) Holliday junction resolvase RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSAKL28_40400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_40400
Enzymes [BR:
palk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
PSAKL28_40400
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSAKL28_40400
RecFOR pathway proteins
PSAKL28_40400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
AIL63187
UniProt:
A0A077FCU4
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All DBs
Position
complement(4425085..4425609)
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AA seq
174 aa
AA seq
DB search
MTLILGIDPGSRITGYGVVRQGPRGCEYVASGCIRTGSGELPERLQIVFRGVREIISQYG
PVTMGIERVFMARNADSALKLGQARGAAIVAAIEEGLEIAEYSATQVKQAVAGTGGANKE
QVQMMVMHLLKLTQKPQIDASDALAIALCHAHTRSSLLPHGLGTARSRSGRLRL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgactctgattcttggcatcgaccctggctcgcgcatcaccggctacggcgtggtgcgc
caggggcctcggggctgcgaatatgtggcttccgggtgtattcgaaccggtagcggcgag
ttgccggagcgcttgcagatcgtgtttcgcggtgtacgagagatcatcagccagtacggc
ccggtgaccatgggcatcgaacgggtgttcatggcgcgcaacgccgattcggcgctgaag
ctggggcaggcgcgtggcgcggccattgtcgctgccattgaagaagggctggagatcgcc
gaatacagcgcaacccaggtcaagcaggccgtcgccggtacaggcggggccaacaaggaa
caagtgcagatgatggtcatgcatctgctcaagctgacccagaaaccgcagatcgatgcc
tccgatgccctggccatcgccctgtgccatgcccacacccgctccagcctgttgccgcac
ggcctgggcaccgcgcgcagccgtagcggacgcttgcggctctga
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