Pantoea ananatis LMG 20103: PANA_0461
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Entry
PANA_0461 CDS
T01195
Symbol
pnp
Name
(GenBank) Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PANA_0461 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pam03019
]
PANA_0461 (pnp)
03016 Transfer RNA biogenesis [BR:
pam03016
]
PANA_0461 (pnp)
Enzymes [BR:
pam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PANA_0461 (pnp)
Messenger RNA biogenesis [BR:
pam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PANA_0461 (pnp)
Transfer RNA biogenesis [BR:
pam03016
]
Prokaryotic type
tRNA degradation factors
PANA_0461 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
SLS1_KH2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ADD75628
UniProt:
D4GI98
LinkDB
All DBs
Position
531899..534172
Genome browser
AA seq
757 aa
AA seq
DB search
MFAEVRAANERLLPQGRLRVVISREDATRIGNQWQAQYSTAPMLRTLILLNPIVRKFQYG
QHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKTKPGQDFFPLTVNYQERTYAAGR
IPGSFFRREGRPSEGETLISRLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVHPDIVAMI
GASAALALSGLPFNGPIGAARVGYINDQYVLNPTADELKTSRLDLVVAGTQNAVLMVESE
AEILSEEQMLGAVVFGHDQQQIVIENINSLVAEAGKPRWDWQPEQANTALISRVAALAET
RISDAYRITDKQERYTQVGVIKDETIAALLAEDESLDAAEIGDIVHSLEKNVVRTRILNG
EPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTRDAQNLDELMGER
TDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKAEDFPYTVRVVSEIT
ESNGSSSMASVCGASLALMDAGVPIKASVAGIAMGLVKEDDKFVVLSDILGDEDHLGDMD
FKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQAISTPRQEISEFA
PRIYTIKINSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGLKAKEAIRRI
EEITAEIEVGRIYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEV
PVKVMEVDRQGRVRLSIKEATETKPEAVAAESAPDAE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgcagaggttcgcgcggctaatgagaggcttttaccgcaggggcggttaagggtt
gtcattagtcgcgaggatgcaacgaggatcggtaatcaatggcaggctcaatatagcact
gccccgatgttaaggactttgattttgcttaatccgatcgtacgcaaattccaatatggt
caacataccgtcacgctggaaaccggcatgatggctcgccaggcgaccgccgccgtgatg
gtgagcatggacgataccgcagtatttgtcaccgttgttggtcagaaaaaaaccaagcca
ggtcaggactttttcccactgaccgttaactatcaggagcgtacttacgctgctggtcgt
atcccaggtagcttcttccgtcgtgaaggtcgcccaagcgaaggcgaaaccctgatttca
cgtctgattgaccgtccggtgcgtccgctgttcccggaaggtttcgtcaacgaagtgcag
gttattgcgaccgttgtttcagttaacccacaggttcacccggacatcgttgccatgatc
ggtgcttctgcagccctggcgctgtcaggtctgcctttcaacggccctatcggtgcggca
cgcgtaggttatatcaatgaccagtatgtactgaacccaacggctgatgagctgaaaaca
tcccgtctggacctggttgttgccggtacacagaacgccgttctgatggtggaatctgaa
gcggaaatcctgtctgaagagcagatgctgggtgcggtggtgtttggccacgatcagcag
cagatcgtgattgaaaacatcaactcactggttgccgaagcgggcaaaccgcgttgggac
tggcagccagagcaggcaaatactgcactgatttcacgcgttgcggcgctggccgaaacc
cgtatcagcgatgcataccgcattaccgataagcaagagcgttacacccaggttggcgtc
attaaagacgaaaccattgctgcgcttctggcagaagatgaatcactcgatgcggccgaa
atcggcgatatcgttcacagcctggaaaagaatgtggttcgtacccgcatcctgaacggc
gagccacgtattgatggccgtgaaaaagacatgatccgtggtctggacgtgcgcacgggc
gttctgccacgtacacacggttccgcactgttcacccgtggtgaaacacaggcgctggtg
accgcgacgctgggcaccacccgcgatgcgcagaacctggatgagctgatgggcgaacgc
accgacagcttcctgttccactataacttccctccgtactccgttggtgagactggtatg
gtgggctcgcctaagcgtcgtgaaatcggtcacggtcgtctggcgaagcgcggcgtgctg
gccgttatgcctaaagctgaagatttcccgtataccgtgcgtgtggtttctgaaatcacc
gaatctaatggttcctcttctatggcctcggtctgtggtgcctctctggcactgatggat
gccggtgtgccaatcaaggcctctgttgcgggtatcgcaatgggcctggtgaaagaagac
gacaagtttgttgtcctgtccgacatcctgggtgatgaagatcatctgggcgatatggac
tttaaagtcgccggtagccgtgaaggtatcactgcgctgcagatggacattaaaatcgaa
ggcatcacccgcgagatcatgcaggttgcgctgaaccaggccaaaggtgcgcgtctgcac
attctgggcgtaatggaacaggctatcagcacgccgcgtcaggaaatctctgagttcgca
ccgcgcatttacaccatcaagatcaattcagacaagatcaaagatgtgattggtaaaggc
ggttctgtgatccgtgcgctgaccgaagaaaccggtacaaccatcgaaatcgaagatgac
ggtaccgtgaaaatcgcagcaaccgatggtctgaaagcgaaagaagcgattcgtcgtatc
gaagagatcaccgcagaaatcgaagtgggccgtatctacagcggtaaagtcacacgtatc
gtagactttggtgccttcgtcgctatcggcggtggtaaagaaggtctggtgcatatttct
caaatcgccgataagcgcgttgagaaagtgactgactatctgcagatgggtcaggaagtc
ccggtgaaggtgatggaagtcgatcgccagggccgcgtacgtctgagcatcaaagaagcg
acagaaaccaagcctgaagctgttgcagctgagagcgcacctgacgctgaataa
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