Pantoea ananatis LMG 20103: PANA_0772
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Entry
PANA_0772 CDS
T01195
Symbol
ligT
Name
(GenBank) LigT
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pam03016
]
PANA_0772 (ligT)
Enzymes [BR:
pam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PANA_0772 (ligT)
Transfer RNA biogenesis [BR:
pam03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PANA_0772 (ligT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ADD75939
UniProt:
D4GKB0
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All DBs
Position
complement(901144..901686)
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AA seq
180 aa
AA seq
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MPETAMASQRLFFAITPPEALQQQLVHWRAHTFSEDAGRPIAAANLHLTLAFLGDVSPET
STQLQTLASRIRQPAFDVALDDAGHWPRPGVVWLGCQRPPRGLLQLASLLRAQAARHGCG
QPAQPFHPHVTLLRAATQPVALPPRGFHWQFSASEFSLFASEYVQGRTRYRTLASWPLLP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ttgccggagaccgccatggcgtcacaacgcttattttttgctattaccccgccagaggcg
ctgcaacagcaactggtgcactggcgggcacacacgtttagtgaggatgctggccgcccg
attgcagccgccaacctccacctgacgctggcttttctgggggatgtctcccctgaaacc
tcaacccagttgcagacgctggcgtcgcgtatccgccagcccgcgtttgacgtcgcatta
gacgatgcgggccactggcctcgtcccggcgtggtgtggctgggttgccagcgtccgccg
cgcggcttgttacagttagcaagcctgctgcgcgcccaggccgcgcgacacggctgcggg
caaccggcccagccctttcatccccacgtgacgctgctgcgtgcggcgacgcagcccgtc
gccctgccccctcgcggctttcactggcaattttcagccagcgaattttcccttttcgcc
tccgagtacgtgcaaggccggacccgctaccgcacgctggccagttggcccttactgcct
taa
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