KEGG   Pseudomonas amygdali: BKM19_001150
Entry
BKM19_001150      CDS       T05354                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pamg  Pseudomonas amygdali
Pathway
pamg02025  Biofilm formation - Pseudomonas aeruginosa
pamg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM19_001150
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    BKM19_001150
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pamg02044]
    BKM19_001150
Secretion system [BR:pamg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BKM19_001150
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AVB12394
UniProt: A0A2S4IG94
LinkDB
Position
125458..125958
AA seq 166 aa
MAFDAYLKVDGIPGEALDAQFKDWIEMENFDIGASQSASATASSAGGATSGRARMSDLFF
RKTVDKATPKLHEACCSGKHFKEVTIAVNRAGTDKLKYLEIVLEEVIISSVSLNGNGDVE
GGFPTETVRLNYGRIKMTYTQQKRADGQGGGQVVGGWDGIANKVYA
NT seq 501 nt   +upstreamnt  +downstreamnt
atggcatttgatgcgtatctgaaagtcgacggaattccaggtgaggctcttgacgctcag
ttcaaggactggatcgaaatggaaaatttcgacataggtgcaagccaatccgcgtcagcg
acggcgagcagtgcaggcggggcaacgagtggtcgtgcacgcatgagtgacctcttcttc
cgcaaaacagtggacaaagccacgccaaaactgcacgaagcttgctgcagtggaaagcac
ttcaaagaggtcaccatcgcggtcaatcgcgcaggcaccgacaaactcaaatacctggaa
atcgtacttgaagaagtcattatttcctccgtctctctcaacggtaatggagatgtagag
ggcggcttccccacagaaacggtacgactgaattatggccgtatcaaaatgacctataca
caacaaaaacgcgcagacgggcaaggtggcggccaggtcgtaggcggttgggatggcatt
gccaacaaggtatacgcctga

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