Pseudomonas amygdali: BKM19_024195
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Entry
BKM19_024195 CDS
T05354
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00300
Lysine biosynthesis
pamg00550
Peptidoglycan biosynthesis
pamg01100
Metabolic pathways
pamg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BKM19_024195
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BKM19_024195
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BKM19_024195
Enzymes [BR:
pamg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BKM19_024195
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Motif
Pfam:
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AVB16309
UniProt:
A0A2G4DAQ3
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All DBs
Position
complement(4966966..4968336)
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AA seq
456 aa
AA seq
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MIKSMTFSELVVPLDARLVAGDCSFDGVSTDSRGIQPGQLFVALTGPRFDGHEYLEQVAA
KGAVGALVEREVQGASLPQLVVLDTRKALAQLGAMNRNAFIDKPVAAMTGSSGKTTVKEM
LASILRTRGTVLATRGNLNNELGVPLTLLELAPEHSAAVIELGASRVGEIAFTVSLTKPH
VAIITNAGTAHVGEFGGPDKIVEAKGEILEGLNASGTAVLNLEDKAFPVWRKRAGNRNIL
TFALADPAADLHASDLSNDARGCPGFTINSPLGVAQVQLNLLGAHNVTNALAAAAAACAL
GVTLEGIVAGLNNVQPVKGRAVVQIASNGTRVIDDTYNANPASINAAVDILTGFTGRTVL
VLGDIGELGEWAEQGHRDVGAYAAGKVSSLYAVGPLMTHAVSAFGEHAYHFASQAELIAA
LGAEQDPNTTLLIKGSRSAAMENVVAALCGSSLEKH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtcaatgacattcagcgaactggtcgtgccgcttgacgcccgtctggtcgct
ggcgactgcagctttgacggtgtgagcaccgacagccgtggtattcagccgggccagctg
ttcgtggccctgaccgggccgcgcttcgacggccatgagtaccttgagcaggtggctgcc
aaaggtgcggtcggtgctctggtcgagcgcgaagtgcagggcgcaagcctgccgcaactg
gtcgtgctcgatacccgcaaggcgctcgcgcaattgggcgcaatgaaccgcaatgcgttc
atcgacaagccggttgcagcgatgaccggttccagcggcaagaccacggtcaaggaaatg
ctcgcgagcatcctgcgtacgcgcggcactgtgctggccactcgtggcaatctgaacaac
gagctgggcgtgccattgacgttactggagctggctcccgagcacagtgcggcggtcatc
gaactgggcgcatcgcgggtgggcgaaattgccttcaccgtgagcctgaccaagccacac
gttgccatcattaccaatgctggaaccgcccatgtcggcgagtttggcgggccggacaaa
attgtcgaggccaagggcgagattctggaaggactcaatgccagcggcaccgcggtgctg
aatctggaggacaaggctttccctgtctggcgcaagcgtgccggcaatcgcaacattctg
accttcgcactggctgaccctgcggcggatctgcacgccagcgaccttagtaatgatgcc
cgcggctgcccaggcttcaccatcaacagcccgctcggcgtcgcccaggttcagttgaat
ctgttgggcgcgcataacgtgaccaacgccctggcggccgcggctgcagcctgcgcactg
ggcgtgacgctggaaggcattgtcgcgggcttgaacaacgtgcagccggtcaagggccgt
gcggttgtgcaaatcgccagcaacggcacgcgcgtcattgatgacacctataacgccaac
cctgcctcgatcaacgcagccgtcgacatccttaccggttttaccggtcgtaccgtgctg
gtgctgggcgatatcggcgagctgggcgagtgggccgaacaaggccatcgcgacgtaggg
gcctatgccgctggcaaggtctcgtcgctgtatgccgtcggcccgttgatgactcatgcc
gtcagcgcctttggtgaacatgcgtaccactttgccagtcaggcagagctgatcgcggcg
ctgggcgccgagcaggaccctaataccactttactgatcaagggctcgcgtagcgctgcg
atggaaaacgtcgtggctgccttgtgcggttctagcctggagaaacattaa
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